| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1549 |
|---|
| Symbol | |
|---|
| ID | 1045456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1749380 |
|---|
| End bp | 1750231 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637144949 |
|---|
| Product | Cro/CI family transcriptional regulator |
|---|
| Protein accession | NP_743706 |
|---|
| Protein GI | 26988281 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2932] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000188053 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA CTGATCGAAT CACCAAACTC GTCCTGACCC GTCGCCCACA GTTGGGCGTT
CGCAATGTCA AACGCGACAT CGCGAACACC TGCGGAATCA GCTATGAGGC TGTCCGCCAG
TGGTTCGCCG GAGATACCGA GAACATCAAG AACGAAAACC TCGTCGCGCT AGCCGAGGGC
TACGACACGA CTGTTGATTG GCTTTTGTCT GGGAAGGGTG AGCCACCACG CAAAGGGGCC
GCTAAGCAAG AGCAAACAAA AGAGGTAAGC ACTCCGAGTT CCGCTGCAGA CGCAGTGCGA
AAGATGCTTG AAAAGCACGG TAAGGGACTG ACCGCTGAGG CCAGGCAGCG GATAGTCAGC
GCGGTGGAGC ATGATCCTCA AGGCGAGAAG GAAAGCGGCT TTTTGATCGC CGCCAACCCT
GCTACCAGGG GTGATATTTC CATCCCGCAG TACGACATTC GGGCGGCAAT GGGTCACGGC
CAAGTCCCAG CTGAATACAG CGAGATCATT AGGAACGTCG TAATAAGTGA AGATTTGCTG
CGTGACAAAG GCGTGAACTA CACGGCGCCT CAGTCCTTGG CCATCATCAC CGGATGGGGC
CAGAGCATGG AAGGCACAAT CAATGACAAG GACCCTGTAA TCGTTGACCG AGGCGTGAAT
GACTACGCAG GGGAAGGCGT TTACGTGCTC ACCTGGCACG GTGACCTTCT GATTAAGCGC
CTGCAGCGGA AAGACGAAGA TCACCTCTGG CTGATCTCCG ACAACCCTCA CAACAAGGAT
CAGCAGGCCA GGATCGACGA TGTGACAATT CACGCCAAAG TGCTACTTGT GTGGAACGCT
CGCAAGGTCT GA
|
|---|
| Protein sequence | MKTTDRITKL VLTRRPQLGV RNVKRDIANT CGISYEAVRQ WFAGDTENIK NENLVALAEG
YDTTVDWLLS GKGEPPRKGA AKQEQTKEVS TPSSAADAVR KMLEKHGKGL TAEARQRIVS
AVEHDPQGEK ESGFLIAANP ATRGDISIPQ YDIRAAMGHG QVPAEYSEII RNVVISEDLL
RDKGVNYTAP QSLAIITGWG QSMEGTINDK DPVIVDRGVN DYAGEGVYVL TWHGDLLIKR
LQRKDEDHLW LISDNPHNKD QQARIDDVTI HAKVLLVWNA RKV
|
|---|
| |