| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1481 |
|---|
| Symbol | |
|---|
| ID | 1045730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1685350 |
|---|
| End bp | 1686774 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637144882 |
|---|
| Product | gamma-aminobutyraldehyde dehydrogenase |
|---|
| Protein accession | NP_743639 |
|---|
| Protein GI | 26988214 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.825614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.424328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGC AGATGCTGAT CAATGGCCAG CTGGTCGCTG GCCAAGGCCC GGCCTGGACC
GTGCTCAACC CGGCGCTGGG CACTGCCCTG GCGCAGATCA ACGAAGCCAC CGAGGCGCAG
GTGGACAGTG CCGTGCGCGC TGCCGACCAG GCCTTCGACA GCTGGTCGCA AACCAGCCCT
AAAGAACGTT CGCAGGCCTT GCTGGCGCTG GCCGATGCCA TCGAAGCCCA TGGCGATGAA
CTGGCCCGGC TGGAATCACA GAACTGCGGC AAGCCCCTGA GCGCTGCACT CAACGACGAG
ATCCCGGCGA TTGCCGACGT GTTCCGTTTC TTTGCCGGTG CGGCGCGCTG CCTGGGCGGC
TCGGCGGCAG GCGAGTACCT GCCGGGCCAC ACCTCGATGA TCCGCCGCGA CCCGTTGGGC
GTGGTGGCTT CCATCGCGCC GTGGAACTAC CCGCTGATGA TGCTGGCCTG GAAGATCGCC
CCAGCCCTGG CTGCCGGCAA CACCGTGGTG ATAAAGCCGT CCGAGCTGAC GCCGCTGACG
GCCCTGCGCC TGGGCGAGCT GGCCCAGGAC TTGCTGCCGC CGGGGGTGCT GAACATTCTC
TTCGGCCGCG GCCAGACGGT CGGCAACCCG TTGATAACCC ACCCCAAGGT GCGCATGGTG
TCGCTGACCG GCTCGATCCC CACCGGCGCG CACATCATCA GCGCCACCGC CGACAGCGTG
AAACGCATGC ACATGGAGCT GGGCGGCAAG GCGCCGGTGC TGGTGTTCGA TGACGCTGAC
ATCGATGCCG CCATCGACGG CATCCGCACC TTCGGCTTCT ACAACGCCGG CCAGGACTGC
ACCGCAGCCT GCCGCCTGTA TGTGCAGGAC GGGATCTACG AGCGCTTTGT CGAACGCCTG
GGTAAAGCCG TAGCCAGCCT CAAGCCGGGC CTGCAGGAGT CTGAAGAAAC CGAACTGGGG
CCACTGATCA GCGCCCAGCA CCGCGACAAG GTCGCCGGGC TGGTGCAGCG GGCCATCGCC
CAGCCGCACA TTCGTCTGGT AACCGGTGGC AAGCCAATAG CGGGCGATGG CTTTTTCTTC
GAGCCTACCG TGCTGGCCGA CGCCCTGCAG GACGACGAGA TCGTGCGCAA CGAAGTGTTT
GGCCCGGTGG TTTCGGTCAC CCGCTTCACC GATGAAGCGC AGGCACTGGA ATGGGCCAAC
GACTCCAACT ACGGCCTGGC CTCATCGGTA TGGACCCGCG ACACCGGCCG CGCCCACCGC
CTGGCGGCGC GCTTGCAGTA TGGCTGCACC TGGGTGAATA CCCACTTCAT GCTGGTCAGC
GAAATGCCCC ATGGCGGGCA GAAGCATTCG GGGTATGGCA AGGACATGTC GATGTATGGG
CTGGAGGACT ACACCTGTGT GCGGCATGTG ATGATCAAGC ATTGA
|
|---|
| Protein sequence | MQTQMLINGQ LVAGQGPAWT VLNPALGTAL AQINEATEAQ VDSAVRAADQ AFDSWSQTSP
KERSQALLAL ADAIEAHGDE LARLESQNCG KPLSAALNDE IPAIADVFRF FAGAARCLGG
SAAGEYLPGH TSMIRRDPLG VVASIAPWNY PLMMLAWKIA PALAAGNTVV IKPSELTPLT
ALRLGELAQD LLPPGVLNIL FGRGQTVGNP LITHPKVRMV SLTGSIPTGA HIISATADSV
KRMHMELGGK APVLVFDDAD IDAAIDGIRT FGFYNAGQDC TAACRLYVQD GIYERFVERL
GKAVASLKPG LQESEETELG PLISAQHRDK VAGLVQRAIA QPHIRLVTGG KPIAGDGFFF
EPTVLADALQ DDEIVRNEVF GPVVSVTRFT DEAQALEWAN DSNYGLASSV WTRDTGRAHR
LAARLQYGCT WVNTHFMLVS EMPHGGQKHS GYGKDMSMYG LEDYTCVRHV MIKH
|
|---|
| |