| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1461 |
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| Symbol | ffh |
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| ID | 1045779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1666755 |
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| End bp | 1668371 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637144862 |
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| Product | signal recognition particle protein |
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| Protein accession | NP_743619 |
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| Protein GI | 26988194 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0499912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.21727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGTCGGG GCATTCGTGG GCACGCCCGC TCCCACAGGT ATGGCGCAGG CCTGCAGGTA
GTGAGGATCC TGTGGGAGCG GGCGCGCCCG CGAAGAGGCC AGCACAGCCA CCGAATATCT
ACCAAGGTGT GCGTCGTCGC TGCACTTCGC TATAATCGCC GCCTTGCTGT GCCCGGCGGG
TGTGTGTTTC CCCCCTGGCA CCTGACAAAC CTCGGCTTTA CTGGGCCTGA AAGGATCACC
ATGTTCGAAA ACCTGACCGA CCGCCTGTCA CAGACGCTGC GCCATGTCAC CGGCAAGGCC
AAGCTGACCG AAGACAACAT CAAGGACACG CTGCGCGAAG TGCGCATGGC GCTGCTCGAG
GCCGACGTTG CCCTGCCGGT AGTCAAGGAT TTCGTCAACA GCGTCAAGGA TCGTGCGGTC
GGGACCGAGG TGTCGCGCAG CCTGACTCCG GGCCAGGCCT TCGTGAAGAT CGTCCAGGCC
GAGCTGGAAA GCCTGATGGG CGCGGCCAAC GAAGACCTCG CACTGAACGC CGCCCCGCCT
GCCGTCGTGC TGATGGCGGG CCTGCAAGGC GCCGGTAAGA CCACCACCGC CGGCAAGCTG
GCGCGCTTTC TTAAAGAGCG CAAGAAAAAG AGCGTGATGG TGGTGTCTGC CGACGTTTAT
CGTCCGGCGG CGATCAAGCA GTTGGAAACA CTGGCCAACG ATATCGGCGT CACCTTCTTC
CCGTCCGATA TCAGCCAGAA GCCGGTGGCC ATCGCCGAAG CCGCCATCCG TGAAGCCAAG
CTGAAGTTCA TTGACGTGGT CATCGTCGAC ACCGCCGGCC GTCTGCACAT CGACGCCGAC
ATGATGGACG AGATCAAGGC GCTGCACGCT GCCGTCAAAC CGATCGAGAC GCTGTTCGTG
GTCGACGCCA TGACCGGCCA GGACGCTGCC AACACCGCCA AGGCCTTTGG CGAGGCGCTG
CCGCTGACCG GTGTGGTGCT GACCAAGGTT GACGGTGATG CCCGAGGCGG TGCTGCGCTG
TCGGTACGTG CAATCACCGG CAAACCGATC AAGTTCATCG GTATGGGTGA GAAGACCGAG
GCCCTCGAGC CGTTCCACCC CGACCGCGTC GCTTCGCGCA TCCTCGGCAT GGGCGACGTG
CTCAGCCTGA TCGAGCAGGC CGAGCAGACC ATCGACAAGG CCAAGGCCGA CAAGCTGGCC
AAGAAACTGA AGAAGGGCAA GGGCTTCGAC CTCGAAGACT TCCGCGACCA GCTGCAGCAA
ATGAAGAACA TGGGCGGCCT CGGCGGCCTG ATGGACAAGC TGCCGAGCAT CGGCGGGGTC
AACCTGTCGC AAATGGGCAA CGCCCAGGGC GCGGCCGAAA AGCAGTTCAA GCAGATGGAA
GCGATCATCA ACTCCATGAC CCCGGCCGAG CGCCGCGACC CTGACCTGAT CAGCGGTTCG
CGCAAGCGCC GTATTGCGTT GGGTTCCGGT ACCCAGGTGC AGGACATCGG CCGGCTGATC
AAGCAGCACA AGCAGATGCA GAAGATGATG AAGAAGTTTT CTGCCAAAGG CGGCATGGCC
AAGATGATGC GCGGCCTCGG TGGGATGCTG CCAGGTGGCG GCATGCCAAA GCTGTAA
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| Protein sequence | MCRGIRGHAR SHRYGAGLQV VRILWERARP RRGQHSHRIS TKVCVVAALR YNRRLAVPGG
CVFPPWHLTN LGFTGPERIT MFENLTDRLS QTLRHVTGKA KLTEDNIKDT LREVRMALLE
ADVALPVVKD FVNSVKDRAV GTEVSRSLTP GQAFVKIVQA ELESLMGAAN EDLALNAAPP
AVVLMAGLQG AGKTTTAGKL ARFLKERKKK SVMVVSADVY RPAAIKQLET LANDIGVTFF
PSDISQKPVA IAEAAIREAK LKFIDVVIVD TAGRLHIDAD MMDEIKALHA AVKPIETLFV
VDAMTGQDAA NTAKAFGEAL PLTGVVLTKV DGDARGGAAL SVRAITGKPI KFIGMGEKTE
ALEPFHPDRV ASRILGMGDV LSLIEQAEQT IDKAKADKLA KKLKKGKGFD LEDFRDQLQQ
MKNMGGLGGL MDKLPSIGGV NLSQMGNAQG AAEKQFKQME AIINSMTPAE RRDPDLISGS
RKRRIALGSG TQVQDIGRLI KQHKQMQKMM KKFSAKGGMA KMMRGLGGML PGGGMPKL
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