| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1436 |
|---|
| Symbol | pdxJ |
|---|
| ID | 1045842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1636547 |
|---|
| End bp | 1637287 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637144837 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | NP_743594 |
|---|
| Protein GI | 26988169 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.532201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCACA GCAACCGCAT GCTTCTTGGC GTCAACATCG ACCACGTGGC GACCCTGCGC
CAGGCCCGTG GCACGCGCTA CCCTGACCCG GTCAAGGCTG CCCTGGACGC CGAGGAAGCA
GGCGCCGATG GCATCACCGT GCACCTGCGT GAAGACCGCC GGCACATCCA GGAGCGTGAC
GTTGTGCTGC TCAAGGATGT GCTGCAGACC CGCATGAACT TCGAGATGGG CGTCACCGAA
GAGATGATGG CCTTTGCCGA AAAGATTCGC CCGGCGCACA TCTGCCTGGT ACCCGAAACC
CGTCAGGAGC TGACCACCGA AGGTGGCCTG GATGTGGCAG GCCAGGAAGC GCGGATCAAG
GCTGCAGTCG AACGGCTGGC GCGTACCGGT GCCGAGGTGT CGCTGTTCAT CGACGCCGAC
GAACGGCAGA TCGAGGCCTC GCGTCGGGTT GGCGCACCGG CCATCGAGCT TCACACCGGC
CGTTATGCCG ATGCCGAAAC CCCCACCGAA GTGGCTGAAG AGCTCAAGCG GATCGTCGAG
GGTGTGGCGT TTGGCGTGGG GCATGGGCTG ATCGTCAATG CCGGTCACGG GCTGCATTAC
CACAACGTCG AGGCGGTGGC GGCGATCAAG GGTATCAATG AGTTGAACAT TGGCCATGCG
CTGGTGGCGC ATGCCTTGTT TGTCGGCTTC AAGGCTGCTG TGGCCGAGAT GAAGGCGCTG
ATCGTGGCGG CTTCGCGCTG A
|
|---|
| Protein sequence | MTHSNRMLLG VNIDHVATLR QARGTRYPDP VKAALDAEEA GADGITVHLR EDRRHIQERD
VVLLKDVLQT RMNFEMGVTE EMMAFAEKIR PAHICLVPET RQELTTEGGL DVAGQEARIK
AAVERLARTG AEVSLFIDAD ERQIEASRRV GAPAIELHTG RYADAETPTE VAEELKRIVE
GVAFGVGHGL IVNAGHGLHY HNVEAVAAIK GINELNIGHA LVAHALFVGF KAAVAEMKAL
IVAASR
|
|---|
| |