Gene PP_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1428 
SymbolmucA 
ID1045853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1627884 
End bp1628474 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content63% 
IMG OID637144829 
Productanti sigma-E protein, RseA 
Protein accessionNP_743586 
Protein GI26988161 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.128867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTG AAGCTTTGCA GGAATCGCTG TCCGCGGTGA TGGATAACGA AGCGGATGAA 
CTGGAACTGC GTCGGGTGTT GAACGCCGTC GACGACGCCG AAACCCGTGC CACCTGGTCG
CGTTACCAGG TTGCCCGTGC AGCCATGCAC AAGGAACTGC TGCTGCCTAA CCTGGATATC
GCCTCGGCGG TGTCCGCGGC GCTGGCCGAC GAAGCCGTGC CAGCCAAGGT CAAGAAAGGC
CCTTGGCGCA GCATTGGCCG TCTGGCGGTA GCCGCCTCGG TTACCGTCGC GGTACTGGCC
GGTGTGCGTA TGTACAACCA GGACGAAATC ACGGGTGCAG AGCTTGCTGC CCAGCAGCCT
GTCCAACAGG GCCTGAGTGT GCCACAAGCG CAAGGCCCGG CCGTTTTGGC AGGCTATAGT
GAAAGCAGTG AGCAACCGAC CGGGCCAATG GCCAATGGCG TGCTGCAGAA CCAGGCCGGC
TGGGATCAGC GTCTGCCAGG CTACCTGCGC CAGCATGCCC AGGAATCTGC GCTCAAGGGC
ACTGAAACCG CATTGCCGTA TGCCCGCGCC GCCAGCCTGG AAAACCGTTA A
 
Protein sequence
MSREALQESL SAVMDNEADE LELRRVLNAV DDAETRATWS RYQVARAAMH KELLLPNLDI 
ASAVSAALAD EAVPAKVKKG PWRSIGRLAV AASVTVAVLA GVRMYNQDEI TGAELAAQQP
VQQGLSVPQA QGPAVLAGYS ESSEQPTGPM ANGVLQNQAG WDQRLPGYLR QHAQESALKG
TETALPYARA ASLENR