Gene PP_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1419 
Symbol 
ID1045868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1618941 
End bp1620230 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content64% 
IMG OID637144820 
Productouter membrane porin 
Protein accessionNP_743577 
Protein GI26988152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.319007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCAT CGCAGCCGCA GGCGTTCGCG CCTACCCGTT CCTTTATCGC TCGCCCCTCG 
GCCATCGCCA GCGCCCTCGC GCTTGCCGGT GTCGCCCCGA TGAGCCAGGC CGCCTTCTTC
GAAGACAGCA CGGCCACCTT CGAAACCCGC AACATGTACT TCAACCGCGA CTTCCGCGAC
GGCACCAGCG CGCAGCAATC CAAGCGCGAT GAATGGGCCC AGGGCTTCAT CCTCAATTTC
GAGTCTGGCT ACACCGATGG CACCGTGGGC TTTGGCCTGG ACGCGTTGGG CATGCTCGGC
ATCAAGCTCG ACTCCAGCCC CGACCGTACC GACAGCGGCC TGCTGCCCAC CCACGATGAC
GGCAAGGCTG CCGACGAATA CTCCAAGCTG GGCCTGACCG GCAAGGTGAA GATCTCCCAG
ACTGAACTCA AGATCGGCAC CCTGATCCCC GAACTGCCGA CCCTGCAGCC CAACGACGGG
CGTATCCTGC CGCAAACCTT CGAGGGCGGC CTGCTCACCT CCAAAGAGAT CAAGGGCCTG
ACCTTCACCG GTGGCCGCAT AGACAAAGCC AAGGACCGCA ACGACACCAA CTGGGAAGAC
CTGGCGCTGA ACAACAAGAA CGGCCGCTTC GGTGGCACCT TCAGCGCTGA CAACCTGGCC
CTGGGCGGGC TCGACTACCA GTTCACCGAC CGCATCACCG GCAGCTACCA CTTCGCCCAG
CTCGACGATA TCTACCGCCA GCACTTCATC GGCATGGTCG CCACCCAACC CTGGGGCCCG
GGCACCCTGG GTGCCGACCT GCGCCTTGCC ATGAGCGACG ACGCCGGTGC AGCCAAGGCC
GGCAACATCG ACAACACCAC CGTCAACGGC ATGCTCAGCT ATGCCCTGGG CGGGCACAAG
GTCAGCGCCG CCTGGCAGCA GTTGTCCGGC GAAAGTGCCT TCCCGTATGT GGATGGCGCC
GACCCGTACC TGGTCAACTT CGTCCAGATC AATGACTTCG CCGGTGCCGA CGAACGCTCC
TGGCAGGCGC GCTACGACTA CAACTTCGCC GCGCTCGGCG TACCGGGCCT GACCTTCATG
ACCCGTTACA TCAGCGGTGA CAACGTCAGC CGGGCTGCCG GTGGCGAAGG CAAAGAGTGG
GAACGCAACA CCGAACTGAA GTACGTGGTA CAAAGCGGCC CGTTGAAGAA CGTCGCCGTG
CGTCTGCGCA ACGCCACCTT CCGCTCCAAC TTCGCCCGTG ACGCGGATGA AGTGAGGCTG
TTGGTCAGCT ACAGCGTGGC GCTGTGGTAA
 
Protein sequence
MLSSQPQAFA PTRSFIARPS AIASALALAG VAPMSQAAFF EDSTATFETR NMYFNRDFRD 
GTSAQQSKRD EWAQGFILNF ESGYTDGTVG FGLDALGMLG IKLDSSPDRT DSGLLPTHDD
GKAADEYSKL GLTGKVKISQ TELKIGTLIP ELPTLQPNDG RILPQTFEGG LLTSKEIKGL
TFTGGRIDKA KDRNDTNWED LALNNKNGRF GGTFSADNLA LGGLDYQFTD RITGSYHFAQ
LDDIYRQHFI GMVATQPWGP GTLGADLRLA MSDDAGAAKA GNIDNTTVNG MLSYALGGHK
VSAAWQQLSG ESAFPYVDGA DPYLVNFVQI NDFAGADERS WQARYDYNFA ALGVPGLTFM
TRYISGDNVS RAAGGEGKEW ERNTELKYVV QSGPLKNVAV RLRNATFRSN FARDADEVRL
LVSYSVALW