Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1419 |
Symbol | |
ID | 1045868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1618941 |
End bp | 1620230 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144820 |
Product | outer membrane porin |
Protein accession | NP_743577 |
Protein GI | 26988152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.319007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCAT CGCAGCCGCA GGCGTTCGCG CCTACCCGTT CCTTTATCGC TCGCCCCTCG GCCATCGCCA GCGCCCTCGC GCTTGCCGGT GTCGCCCCGA TGAGCCAGGC CGCCTTCTTC GAAGACAGCA CGGCCACCTT CGAAACCCGC AACATGTACT TCAACCGCGA CTTCCGCGAC GGCACCAGCG CGCAGCAATC CAAGCGCGAT GAATGGGCCC AGGGCTTCAT CCTCAATTTC GAGTCTGGCT ACACCGATGG CACCGTGGGC TTTGGCCTGG ACGCGTTGGG CATGCTCGGC ATCAAGCTCG ACTCCAGCCC CGACCGTACC GACAGCGGCC TGCTGCCCAC CCACGATGAC GGCAAGGCTG CCGACGAATA CTCCAAGCTG GGCCTGACCG GCAAGGTGAA GATCTCCCAG ACTGAACTCA AGATCGGCAC CCTGATCCCC GAACTGCCGA CCCTGCAGCC CAACGACGGG CGTATCCTGC CGCAAACCTT CGAGGGCGGC CTGCTCACCT CCAAAGAGAT CAAGGGCCTG ACCTTCACCG GTGGCCGCAT AGACAAAGCC AAGGACCGCA ACGACACCAA CTGGGAAGAC CTGGCGCTGA ACAACAAGAA CGGCCGCTTC GGTGGCACCT TCAGCGCTGA CAACCTGGCC CTGGGCGGGC TCGACTACCA GTTCACCGAC CGCATCACCG GCAGCTACCA CTTCGCCCAG CTCGACGATA TCTACCGCCA GCACTTCATC GGCATGGTCG CCACCCAACC CTGGGGCCCG GGCACCCTGG GTGCCGACCT GCGCCTTGCC ATGAGCGACG ACGCCGGTGC AGCCAAGGCC GGCAACATCG ACAACACCAC CGTCAACGGC ATGCTCAGCT ATGCCCTGGG CGGGCACAAG GTCAGCGCCG CCTGGCAGCA GTTGTCCGGC GAAAGTGCCT TCCCGTATGT GGATGGCGCC GACCCGTACC TGGTCAACTT CGTCCAGATC AATGACTTCG CCGGTGCCGA CGAACGCTCC TGGCAGGCGC GCTACGACTA CAACTTCGCC GCGCTCGGCG TACCGGGCCT GACCTTCATG ACCCGTTACA TCAGCGGTGA CAACGTCAGC CGGGCTGCCG GTGGCGAAGG CAAAGAGTGG GAACGCAACA CCGAACTGAA GTACGTGGTA CAAAGCGGCC CGTTGAAGAA CGTCGCCGTG CGTCTGCGCA ACGCCACCTT CCGCTCCAAC TTCGCCCGTG ACGCGGATGA AGTGAGGCTG TTGGTCAGCT ACAGCGTGGC GCTGTGGTAA
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Protein sequence | MLSSQPQAFA PTRSFIARPS AIASALALAG VAPMSQAAFF EDSTATFETR NMYFNRDFRD GTSAQQSKRD EWAQGFILNF ESGYTDGTVG FGLDALGMLG IKLDSSPDRT DSGLLPTHDD GKAADEYSKL GLTGKVKISQ TELKIGTLIP ELPTLQPNDG RILPQTFEGG LLTSKEIKGL TFTGGRIDKA KDRNDTNWED LALNNKNGRF GGTFSADNLA LGGLDYQFTD RITGSYHFAQ LDDIYRQHFI GMVATQPWGP GTLGADLRLA MSDDAGAAKA GNIDNTTVNG MLSYALGGHK VSAAWQQLSG ESAFPYVDGA DPYLVNFVQI NDFAGADERS WQARYDYNFA ALGVPGLTFM TRYISGDNVS RAAGGEGKEW ERNTELKYVV QSGPLKNVAV RLRNATFRSN FARDADEVRL LVSYSVALW
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