Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1416 |
Symbol | |
ID | 1045917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1615740 |
End bp | 1617254 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144817 |
Product | tricarboxylate transport protein TctA, putative |
Protein accession | NP_743574 |
Protein GI | 26988149 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCT TGAGCTACCT GGGCCAGGGC TTCGGCATTG CCCTGTCCCC CTACAACCTG GTCACCGCCC TCTCCGGCAC CTTGATCGGC ACCGTGGTCG GCCTGCTACC GGGCCTGGGC CCGATCAACG GCGTGGCCCT GCTGATCCCC ATCGCCTTTG CCCTCGGCCT GCCGCCGGAA TCGGCGCTGA TCCTGCTGGC CGCAGTGTAC CTGGGCTGCG AATATGGCGG GCGTATCAGC TCGATCCTGC TGAACATCCC GGGCGAAGCC TCGACCGTCA TGACCACCCT CGATGGTTAC CCGATGGCCC GCCAGGGCCT GGCCGGTGTT GCCCTGTCGC TGTCGGCCTG GAGTTCGTTC ATCGGCGCCT TCATCGCCAC CTGCGGCATG GTGCTGTTCG CCCCGCTGCT GGCGAAATGG GCCATCGCCT TCGGCCCGGC GGAGTACTTT GTGCTGATGG TGTTCGCCAT CGTCGCGTTG GGTGGCATGG CCGGTGACAA ACCACTGAAA ACCTTCATTG CCGCTCTCAT CGGCCTGTTC CTCTCGGCGG TCGGCATCGA CGCCAACAGC GGCGTGTACC GCTTCACCGG TGACAGCGTG CACCTGGCCG ACGGCATTCA GTTCGTGGTC CTCGTGCTGG GCCTGTTCTC CATCAGCGAA ATCCTCCTGC TGCTGGAAAA GACCCACCAT GGCCACCAGG CGGTCAAGGC TACCGGCCGT ATGCTGTTCA ACTTCAAGGA AGCGGCCTCG GTGTTCCTGG TCAACATCCG TTGCGGCCTG CTTGGTTTCA TCATGGGTGT TCTACCCGGC GCCGGCGCAA CGCTGGCCAG CGCCGTGGCC TACATGACCG AGAAACGCAT GGCCGGGGAA AGCGGCAAGT TCGGCAAAGG CGATGCCCGT GGCCTGGCAG CCCCGGAAAC TGCCATTGGT GCGTCCTGCT GTGGCGCCCT GGTCCCGATG CTGACCCTGG GTGTCCCGGG CTCTGGCACC ACGGCCGTGA TGATCGGCGC CCTGACCCTG TACAACATCA CCCCTGGCCC ACTGCTGTTC GAACAGCAGC CAGATATCGT CTGGGGCCTG ATCGCCTCGC TGTTCGTCGC CAACATCATG TTGGTAATCC TCAACATCCC GATGATCCGC ATCTTCACCC GCATCCTCGC CGTGCCAAAC TGGGCGCTGG TGCCGGTGAT CGCCATCATC ACCGCGATCG GCGTTTACGC CGTGCATGCC ACTACCTTCG ACCTGTTCCT GATGGTCGGC ATCGGCATCA TGGGCTACAT CATGCGCAAG CTGGACTTCC CACTGTCGCC GATTCTGCTG GGCTTCATCC TCGGCGGGCT GATGGAGCAG AACCTGCGTC GGGCGCTGTC GATCTCCAAC GGCGAACTGG GCATCCTCTG GTCGAGCCCG ATCAGCATGG GCATCTGGGC GCTGGTAGTG GTAATGCTCG CCCTGCCGCT GCTGCGCATC TGGCGCAAAC GCAGCCTGCA GCGCCGGGCC CTGGCCGATG CCTGA
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Protein sequence | MDTLSYLGQG FGIALSPYNL VTALSGTLIG TVVGLLPGLG PINGVALLIP IAFALGLPPE SALILLAAVY LGCEYGGRIS SILLNIPGEA STVMTTLDGY PMARQGLAGV ALSLSAWSSF IGAFIATCGM VLFAPLLAKW AIAFGPAEYF VLMVFAIVAL GGMAGDKPLK TFIAALIGLF LSAVGIDANS GVYRFTGDSV HLADGIQFVV LVLGLFSISE ILLLLEKTHH GHQAVKATGR MLFNFKEAAS VFLVNIRCGL LGFIMGVLPG AGATLASAVA YMTEKRMAGE SGKFGKGDAR GLAAPETAIG ASCCGALVPM LTLGVPGSGT TAVMIGALTL YNITPGPLLF EQQPDIVWGL IASLFVANIM LVILNIPMIR IFTRILAVPN WALVPVIAII TAIGVYAVHA TTFDLFLMVG IGIMGYIMRK LDFPLSPILL GFILGGLMEQ NLRRALSISN GELGILWSSP ISMGIWALVV VMLALPLLRI WRKRSLQRRA LADA
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