| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1376 |
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| Symbol | pcaK |
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| ID | 1043926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1567513 |
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| End bp | 1568859 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144777 |
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| Product | benzoate transport |
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| Protein accession | NP_743535 |
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| Protein GI | 26988110 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.282947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAG CGCAAACCAA CGTCGGCAAA AGCCTCGACG TTCAGTCATT CATCAATCAG
CAGCCGCTGT CCCGCTATCA GTGGCGGGTC GTGCTGCTGT GCTTCCTGAT CGTCTTCCTC
GACGGCCTGG ACACCGCTGC CATGGGGTTC ATCGCCCCTG CACTGTCGCA AGAGTGGGGG
ATCGACCGCG CCAGCCTTGG GCCGGTCATG AGTGCCGCGT TGATCGGCAT GGTGTTCGGT
GCCTTGGGCT CCGGGCCGCT GGCTGACCGT TTCGGCCGCA AAGGCGTGCT GGTGGGGGCG
GTGCTGGTGT TCGGTGGCTT CAGCCTGGCC TCGGCCTATG CCACCAACGT CGACCAGTTG
CTGGTACTGC GCTTCCTGAC TGGCCTGGGC CTGGGTGCAG GCATGCCCAA CGCTACCACG
CTGTTGTCCG AATACACCCC GGAGCGCCTC AAGTCGCTGC TGGTGACCAG CATGTTCTGT
GGCTTCAACC TGGGCATGGC GGGTGGTGGC TTCATTTCCG CCAAGATGAT CCCGGCCTAC
GGCTGGCACA GCCTGCTGGT CATCGGTGGC GTGCTGCCGT TGCTGCTGGC GCTGGTGCTG
ATGATCTGGC TGCCGGAGTC GGCGCGGTTC CTGGTGGTGC GCAACCGCGG CACCGACAAG
GTGCGCAAGA CCTTGTCGCC AATCGCGCCG CAAGTGGTGG CCGAGGCAGG CAGTTTCAGC
GTGCCTGAGC AAAAGGCGGT GGCTGCGCGC AACGTGTTCG CGGTGATCTT CTCTGGCACC
TATGGCTTGG GCACCGTGTT GCTGTGGCTG ACCTATTTCA TGGGCCTGGT GATCGTCTAC
CTCCTGACCA GCTGGCTGCC AACCCTGATG CGTGACAGCG GCGCGAGCAT GGAGCAGGCG
GCGTTCATCG GCGCGCTGTT CCAGTTTGGC GGCGTGCTAA GTGCAGTCGG TGTGGGTTGG
GCCATGGACC GTTTCAATCC GCACAAGGTA ATTGGCATTT TCTATCTGCT GGCCGGGGTG
TTCGCCTACG CAGTGGGGCA GAGCCTGGGC AACATCACTC TGCTAGCCAC GCTGGTGCTC
GTCGCTGGTA TGTGCGTGAA CGGTGCGCAG TCGGCAATGC CATCGCTGGC GGCGCGCTTC
TATCCCACCC AGGGCCGGGC CACAGGCGTA TCGTGGATGC TGGGTATTGG CCGCTTTGGT
GCGATTCTCG GCGCCTGGAG TGGTGCAACG CTGCTGGGCC TGGGCTGGAG CTTCGAGCAG
GTGCTGACGG CGTTGCTGGT ACCGGCGGCG CTGGCGACCG TGGGAGTGGT CGTCAAGGGG
CTGGTCAGCC ACGCCGACGC AACCTGA
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| Protein sequence | MNQAQTNVGK SLDVQSFINQ QPLSRYQWRV VLLCFLIVFL DGLDTAAMGF IAPALSQEWG
IDRASLGPVM SAALIGMVFG ALGSGPLADR FGRKGVLVGA VLVFGGFSLA SAYATNVDQL
LVLRFLTGLG LGAGMPNATT LLSEYTPERL KSLLVTSMFC GFNLGMAGGG FISAKMIPAY
GWHSLLVIGG VLPLLLALVL MIWLPESARF LVVRNRGTDK VRKTLSPIAP QVVAEAGSFS
VPEQKAVAAR NVFAVIFSGT YGLGTVLLWL TYFMGLVIVY LLTSWLPTLM RDSGASMEQA
AFIGALFQFG GVLSAVGVGW AMDRFNPHKV IGIFYLLAGV FAYAVGQSLG NITLLATLVL
VAGMCVNGAQ SAMPSLAARF YPTQGRATGV SWMLGIGRFG AILGAWSGAT LLGLGWSFEQ
VLTALLVPAA LATVGVVVKG LVSHADAT
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