| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1325 |
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| Symbol | |
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| ID | 1041718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1509745 |
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| End bp | 1511562 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637144727 |
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| Product | LppC family lipoprotein |
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| Protein accession | NP_743485 |
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| Protein GI | 26988060 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.967741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTT GCCTGCGGCT GCTCACAGCC CTCTGCCTCG CCGCCCTGCT GGCAGCCTGC
GCCAGCTCGC CCTCATCCAG CCTGGGCGAA CTACCACGCA CCCCGGACGC CAGCATCGAG
CAACTGCTCG AAAAGGCCGC TTCCAGCAAG TCTGCGGAAG ACGCCGCGCT GCTGCGCCTG
AGCGCCGCCG ACCTGGCCTA CAAGCAGAAG GACTTCCCAC GCGCCGCACG CATTCTCGAG
CAGGTCCCGC TGGACACGCT CAAGCCGGCC CAGCAAGTGT TCGCCAGCAC CCTCGCGGCC
GAGCTGGCCA TGAGCCGCAA CCAGCCCAAG GCAGCGCTGA CCGCCCTGGC CCACCCCAGC
CTGCAGCGCC TCGCCGAACT GCCGGCAGAC CTGCAAGCGC GCACCTACAG TGTGCACGCC
GCCGCGCTCG AAGCCGATGG CCAGGCCCTG GCTGCCGCAC AGCAGCGCAT CCTGCTGGCC
CCGCTGCTTG GCGGCCAGGC CGCCAGCACC AACAATGACG CCATCTGGGC CTTGGTCGCC
TCGCTGCCTG CAGAGCAACT GCAGCAGCCA ACCAACGATC AGACCCTGGC TGGCTGGACC
AGCCTGGCCT TCGCCGTGAA AAGCGCCGGC ACCCTGGAGC AGCAGCAAGC GGCCATCGAA
GCCTGGGTCA AACAGCACCC GGACCACCCT GCCGCCCAGC AACTGCCGCT GGCCCTGACC
AAGCTCAAGG AGCTGGCCAG CCAGCCGCTG ACCAAGATCG CCCTGCTGCT GCCTCAGGAA
GGCCCGCTGG CCGGTGTAGC CCGCGCCCTG CGCGATGGCT TCATGGCCGC CCACTTCCAG
GCCCAGCAAA GCGGCCAGCC AGCGCCTGCG GTACAGGTGT TCGACAGCTC ACGCATCGGC
TCGCTGGACG ACTTCTATCG CCAGGCGCAA GCCGCCGGCG TGCAACTGGT CATCGGCCCG
CTTGAAAAGC CATTGGTCAA ACAACTGGCC GCCAAACCAC AGCTGCCGAT CACCACACTG
GCCCTGAACT ACGCCGACGC TGGCCAGAAG GCGCCGCCAC AACTGTTCCA GTTCGGCCTG
GCTGCCGAGG ACGAAGCCCG CGAAGTGGCC CGCCGCGCCC GCGCCGATGG CATGGTCCGC
GCCGTTGCCC TGGTGCCGAG CGGCGAATGG GGTGACCGTG TCCTGGCCGC CTTCCGCCAG
GACTGGGAAG GCAATGGCGG AACCCTGCTC GCCGCCGAGC GCATCGCCCA GCCGGTCGCC
CTGGCCCAGC AAATTGCCGA CCTGTTCCAG CTGCGCCAGA GCGAAGGCCG CGCCAAGAGC
CTGCAAAGCA CGGTGGGCGG CAGCATCGCT GCACAACCGT CGCGCCGCCA GGACATCGAC
TTCATCTTCC TCGCCTCGAC CCCACAACAG GCGCAACAGA TCAAGCCGAC CCTGAACTTC
CAGTACGCCG GTGACGTGCC GGTCTATGCC ACCTCGAACC TGTACAGCGC CAGCGGTGAC
ATCAACCAGT ACAATGACAT GAACGGCATC CGCTTCTGCG AAACACCGTG GCTGCTCGAC
ACCAGCAACA GCCTGCGTCA ACAGGTTGTA CAGCAGTGGC CGCAAGCCGC CGGCAGCCTC
GGCCGCCTGT ATGCCATGGG CGTCGATGCC TACAGCCTGG CGCCGCGCCT GGGCCAACTG
AAAGCGCTAC CGGACAACCG CGTCCTTGGC CTTTCGGGCA GCCTGAGCAT CAATGCCAAC
CAGCGCGTCG AACGCCAGCT GCCTTGGGCC GAGTTTAGCG GCGGCCAGGT CAAGCGCCTG
CCTGACACCG TGCGTTGA
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| Protein sequence | MIACLRLLTA LCLAALLAAC ASSPSSSLGE LPRTPDASIE QLLEKAASSK SAEDAALLRL
SAADLAYKQK DFPRAARILE QVPLDTLKPA QQVFASTLAA ELAMSRNQPK AALTALAHPS
LQRLAELPAD LQARTYSVHA AALEADGQAL AAAQQRILLA PLLGGQAAST NNDAIWALVA
SLPAEQLQQP TNDQTLAGWT SLAFAVKSAG TLEQQQAAIE AWVKQHPDHP AAQQLPLALT
KLKELASQPL TKIALLLPQE GPLAGVARAL RDGFMAAHFQ AQQSGQPAPA VQVFDSSRIG
SLDDFYRQAQ AAGVQLVIGP LEKPLVKQLA AKPQLPITTL ALNYADAGQK APPQLFQFGL
AAEDEAREVA RRARADGMVR AVALVPSGEW GDRVLAAFRQ DWEGNGGTLL AAERIAQPVA
LAQQIADLFQ LRQSEGRAKS LQSTVGGSIA AQPSRRQDID FIFLASTPQQ AQQIKPTLNF
QYAGDVPVYA TSNLYSASGD INQYNDMNGI RFCETPWLLD TSNSLRQQVV QQWPQAAGSL
GRLYAMGVDA YSLAPRLGQL KALPDNRVLG LSGSLSINAN QRVERQLPWA EFSGGQVKRL
PDTVR
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