Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1280 |
Symbol | algI |
ID | 1042485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1461465 |
End bp | 1462922 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144682 |
Product | alginate O-acetylation protein AlgI |
Protein accession | NP_743440 |
Protein GI | 26988015 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1696] Predicted membrane protein involved in D-alanine export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0937854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTTCT CGTCCAACGT GTTCCTGTTC CTGTTCTTGC CGATCTTCCT CGGCCTGTAC TACTTGAGCG GGCAACGTTA TCGCAACCTG CTGCTGCTGG TCGCCAGCTA CATCTTCTAC GCCTGGTGGC GGGTGGACTT CCTGGCACTG TTCGCCGGCG TCACCCTGTG GAACTACTGG ATCGGCCTGA AAGTCGGTGC CGCCGGTGTG CGCACCAAGC CTGCGCAGCG CTGGCTGCTG CTCGGCGTGG GTGTCGACCT GGCAATCCTC GGCTACTTCA AGTACGCCAA CTTCGGCGTC GACAGCCTGA ACGCGATCAT GACGTCGTTT GGCCTGGAGC CATTCATTCT GACCCACGTG CTGCTGCCGA TCGGTATCTC GTTCTACATC TTCGAGTCGA TCAGCTACAT CATCGACGTA TACCGCGGTG ACACCCCGGC TACCCGCAAC CTGATCGACT TCGCAGCGTT CGTGGCGATT TTCCCGCACC TGATCGCAGG CCCCGTGCTG CGCTTCAAGG ATTTGGTCGA CCAGTTCAAC AACCGCACCC ACACCCTGGA CAAGTTCTCC GAAGGCTGCA CCCGCTTCAT GCAGGGCTTC ATCAAGAAAG TGTTCATCGC CGACACCCTG GCCGTGGTCG CCGACCACTG CTTCGCCCTG CAAAACCCCA CCACGGGCGA TGCCTGGCTC GGCGCCCTGG CCTACACCGC ACAGCTGTAC TTCGACTTCA GCGGCTACAG CGACATGGCC ATCGGCCTGG GCCTGATGAT GGGCTTCCGC TTCATGGAAA ACTTCAAGCA GCCCTATATC AGCCAGTCGA TCACCGAGTT CTGGCGGCGC TGGCATATCA GCCTGTCGAC CTGGCTGCGC GACTATCTGT ACATCACCCT GGGCGGTAAC CGCAAAGGCA CCTTCAATAC CTACCGCAAC CTGTTCCTGA CCATGCTGCT GGGCGGCCTG TGGCACGGTG CAAACTTCAC CTACATCATC TGGGGCGCCT GGCACGGCAT GTGGCTGGCC ATCGAGCGCG CGTTGGGCCT CGACACCAAC CCGCAGCGCT TCAACCCGGT GAAGTGGGCC TTCACCTTCC TGCTGGTGGT AGTCGGTTGG GTGATCTTCC GCGCCGAAAA CCTGCATGTG GCCGCCCGTA TGTACGGCGC GATGTTCAGC TTCGGCGACT GGCAGCTGTC GGAGCTCAAC CGCGCCCAGC TCACCGGTCT GCAGGTGGCC ACCCTGGTCA TCGCCTACCT CACCCTGGCG TTCTTCGGCC TGCGCGACTT CTACCGCAAT GCCAGGCCGA CGCCCAAGGC GACCCCGGTG CAGGTCAACG CTGACGGCTC GATCGGCCTG GACTGGACCC GGGTGATGAC CCGCGCACTG ATCCTGCTGC TGTTCGTCGC CTCGATCCTC AAGCTTTCGG CGCAAAGCTA CTCGCCGTTC CTTTACTTCC AGTTCTGA
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Protein sequence | MVFSSNVFLF LFLPIFLGLY YLSGQRYRNL LLLVASYIFY AWWRVDFLAL FAGVTLWNYW IGLKVGAAGV RTKPAQRWLL LGVGVDLAIL GYFKYANFGV DSLNAIMTSF GLEPFILTHV LLPIGISFYI FESISYIIDV YRGDTPATRN LIDFAAFVAI FPHLIAGPVL RFKDLVDQFN NRTHTLDKFS EGCTRFMQGF IKKVFIADTL AVVADHCFAL QNPTTGDAWL GALAYTAQLY FDFSGYSDMA IGLGLMMGFR FMENFKQPYI SQSITEFWRR WHISLSTWLR DYLYITLGGN RKGTFNTYRN LFLTMLLGGL WHGANFTYII WGAWHGMWLA IERALGLDTN PQRFNPVKWA FTFLLVVVGW VIFRAENLHV AARMYGAMFS FGDWQLSELN RAQLTGLQVA TLVIAYLTLA FFGLRDFYRN ARPTPKATPV QVNADGSIGL DWTRVMTRAL ILLLFVASIL KLSAQSYSPF LYFQF
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