Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1270 |
Symbol | |
ID | 1042090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1450815 |
End bp | 1451720 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144672 |
Product | LysR family transcriptional regulator |
Protein accession | NP_743430 |
Protein GI | 26988005 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTCC CGGACATGAA CCTGCTCGTC GCCCTCGATG CCTTGCTCGA CGAGGGCAGC GTGGTGGGCG CAGCGCAGCG CATGAACCTG AGCCCGGCGG CCATGAGCCG GACATTGGGG CGTATCCGCG ATGCCTTGGG TGACCCGATC CTGGTGCGCG CCGGCCGTGG CCTGGTGCCT ACGCCCCGTG CGTTGGCCCT GCGCGAGCAG GTGCATGGCC TGGTGGAGCA GGCCGGGCAG GTGTTCCGCA GCCGTGACGA TGTCGACCTG GTGAACCTGG ACCGTGCCTT CAACATCCGC ACCAATGATT TGTTCATTGC CCTTTACGGC GCCCAGCTGC TGCGCATGAT GCTGGCCCAG GCGCCGCGTA CGGTGTTGCG GTTTGTCCCG GAGGGCAGTG GTGACGATGA TGCAGTGCTG CGCAACGGGC ATATCGACCT GATCATCAGC TCGGCCATTG AACTGGGCCC GGAAATCAAG GTGCAGAGCC TGTTCAATAC TTACTTTGTA GGCCTGGCGC GTGTGGGCCA CCCTATCTTC GATGCCCCGA TCACCCCTGA GCGTTTTGCC GCCTACCCGC AGATCAGCGT GTCTCGACGC GGCCGTGCCA ACGGGCCGAT CGATGTGGCG TTGGCCAACC ACAAGGTGGA GCGGCGCGTG GCCCTGATCA CCACCAGCTT CCACTCGGCG ATGTTCTCGC TGCCGGATTC GGACCTGATC CTGCCGATAC CCGCCAATAT CCTCAACAGT GTGCAGCGGT TGAAGTTGCC ATTGCGCTCG TTCGAGATCC CGGTGCCGTT GGAGACGGTC AATGTAATGC AGGCGTGGCA CCCGCGCTTC GACAACGACC CCGCGCACCG TTGGTTGCGC CAGACGTTGA AAGCGTGTGG CCGCATCGAT CCGTGA
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Protein sequence | MQLPDMNLLV ALDALLDEGS VVGAAQRMNL SPAAMSRTLG RIRDALGDPI LVRAGRGLVP TPRALALREQ VHGLVEQAGQ VFRSRDDVDL VNLDRAFNIR TNDLFIALYG AQLLRMMLAQ APRTVLRFVP EGSGDDDAVL RNGHIDLIIS SAIELGPEIK VQSLFNTYFV GLARVGHPIF DAPITPERFA AYPQISVSRR GRANGPIDVA LANHKVERRV ALITTSFHSA MFSLPDSDLI LPIPANILNS VQRLKLPLRS FEIPVPLETV NVMQAWHPRF DNDPAHRWLR QTLKACGRID P
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