Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1262 |
Symbol | |
ID | 1042458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1443236 |
End bp | 1444183 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637144664 |
Product | LysR family transcriptional regulator |
Protein accession | NP_743422 |
Protein GI | 26987997 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.902208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCC TGCAAAACAT GCGTGCTTTC AGTTGCGTAG CCCAACTCGG CAGCTTCACT GCCGCTGCGG CGCAACTGGA TACGACCACC GCGAACGTGT CGCGGGCGGT CTCCAACCTG GAAGCCCATC TGCAAACAAG GCTGCTCAAC CGTACCACCC GCCGCATTGC GCTGACCGAA GCCGGCAAGC GTTACCTGAT GCGTTGCGAA CAGATTCTTA CCTACGTCGA AGAAGCCGAG GCCGAAGCCA GCGACGCCCA TGCGCGCCCG GCCGGGCAGT TGAAGGTGCA TTCGATGACT GGGGTCGGCC AGCACTTCGT GGTCGATGCC ATCGCCCGCT ACCGCGAAAC GCACCCGGAC GTGACCTTCG ATTTGACCAT GGCCAACCGC GTGCCCGATC TGCTCGACGA GGGTTATGAC GTCTCCATCG TGCTGGCCAC CGAACTGCCC GACTCGGGGT TCGTTTCGCA GCGCCTGGGC ATCACCTACA GCATTGTCTG TGCCTCGCCC GCCTACATCG CCCAGCATGG CGTGGCGCAC AAGCCTGCCG ACCTGCTCAA GCACGCCTGC CTGCGCATGG TCAGCCCGGT GATACCGCTG GAGAAGTGGC TGTTCGATGG CCCGGAAGGC CAAGAGATGG TCAACATCAC CAGTTCGCCG TTCATGGTGA ACACCGCCGA TGCCATGAAG ACTGCGATCC GCAGTGGCAT GGGCGTAGGC GTGCTGCCGA TCTATTCGGC TATCGAGGGC CTGCGGGACG GTAGCCTGGT ACGGGTACTG CCGGAGTATC GCCTGCAGGA GTTGAACCTG TATGCCATCT ATCCATCGCG GCAGTATCTG GATGCCAAGA TCAAGACCTG GGTCGAGTAC CTGCGCAACT CGCTGCCAGA GATTCTTGCC GCGCATGAGG CAGACCTGAA AACCCATCAG GTGCTGATCG CCAACTAA
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Protein sequence | MDTLQNMRAF SCVAQLGSFT AAAAQLDTTT ANVSRAVSNL EAHLQTRLLN RTTRRIALTE AGKRYLMRCE QILTYVEEAE AEASDAHARP AGQLKVHSMT GVGQHFVVDA IARYRETHPD VTFDLTMANR VPDLLDEGYD VSIVLATELP DSGFVSQRLG ITYSIVCASP AYIAQHGVAH KPADLLKHAC LRMVSPVIPL EKWLFDGPEG QEMVNITSSP FMVNTADAMK TAIRSGMGVG VLPIYSAIEG LRDGSLVRVL PEYRLQELNL YAIYPSRQYL DAKIKTWVEY LRNSLPEILA AHEADLKTHQ VLIAN
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