Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1252 |
Symbol | |
ID | 1042461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1429961 |
End bp | 1431382 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637144654 |
Product | group II intron-encoding maturase |
Protein accession | NP_743412 |
Protein GI | 26987987 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.811711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.20337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCAG TAGGCGTCGC CGTCTCGTTG GTAACCGTAA TGCAGAAATT TCCCACAGCG GAAACTGTCA TCCCGAGCTC CGGCCAGAAG CCGAGGGTGA CGCCTGACAG TGCAAAGGTA TCGACGGCGT CCGTGACGTG GACGAACGCG GAGCCGGACA CGCTGATGGA GCGGGTGCTT GCACCGGCCA ACCTCAGACG TGCGTATCAA CGTGTGGTCA GCAACAAGGG AGCACCGGGT GCCGATGGCA TGACGGTCGC TGACTTGGCG GGCTACGTGA GACAGTATTG GCCAACCCTC AAGGTCAGGT TACTGGCCGG TGAATACCAG CCCCAAGCAG TGCGAGCGGT TGAAATTCCC AAGCCGCAGG GCGGCACACG GCAACTGGGA ATCCCCAGCG TCGTGGATCG CCTGATCCAG CAAGCACTGC AGCAGCAGCT CACACCTATC TTCGACCCAC TGTTCTCGGA CTACAGCTAT GGTTTTCGTC CGGGCAGAAG TACGCATCAA GCCATCGAGA TGGCCCGTGC TCATGTGACA GCGGGACACC GCTGGTGCGT GGAACTCGAT CTGGAGAAGT TTTTCGATCG GGTCAATCAC GACATCCTCA TGGCCTGCAT CGAACGTCGG ATCAGAGACA AGTGCGTACT CAGGCTTATC CGCCGCTACC TTGAAGCCGG GATCATGTCG GGCGGTGTCG TCAGCCCACG GCAGGAGGGG ACGCCGCAAG GCGGCCCGCT CTCGCCGTTG CTGTCGAATA TCCTGCTCGA CGAACTCGAC CGCGAGCTGG AGCGGCGGGG CCATCGCTTC GTACGTTATG CCGATGATGC GAACATCTAT GTACGCAGTC CCCGGGCCGG CGAACGGGTG TTGGTCAGCG TCGAGCGCTT CCTGAGAGAA CGTCTGAAGC TGACGGTGAA CAGGAAGAAA AGCCAAGTGG CAAGGGCGTG GAAGTGCGAC TACCTAGGCT ATGGGATGAG CTGGCACCAG CAGCCAAGAC TGCGCGTGGC AAGGATGAGC CTAGACCGCT TACGCGACCG GCTCAGAATG CTGCTGCGCA GCGTACGGGC TCGCAAAATG GCGACTGTCA TCGAGCGGAT CAACCCCGTC CTGAGAGGCT GGGCTAGCTA CTTCAAGCTC AGCCAGAGCA AGCGGCCGCT TGAGGAACTG GATGGTTGGG TCAGGCACAA ACTCCGCTGC GTCATCTGGC GTCAATGGAA ACAGCCTCCC ACGAGGCTGA GAAACTTGAT GCGCCTGGGG TTGAGCGAGG AGCGTGCCAA CAAGTCAGCC TTCAATGGCC GAGGTCCATG GTGGAATTCG GGAGCGCAAC ATATGAACTA CGCGCTGCCA AAGAAACTGT GGGACCGGCT CGGGCTGGTC TCGATACTGG ATACGATTAA CCGGCTTAGC CGCGTAACCT GA
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Protein sequence | MPPVGVAVSL VTVMQKFPTA ETVIPSSGQK PRVTPDSAKV STASVTWTNA EPDTLMERVL APANLRRAYQ RVVSNKGAPG ADGMTVADLA GYVRQYWPTL KVRLLAGEYQ PQAVRAVEIP KPQGGTRQLG IPSVVDRLIQ QALQQQLTPI FDPLFSDYSY GFRPGRSTHQ AIEMARAHVT AGHRWCVELD LEKFFDRVNH DILMACIERR IRDKCVLRLI RRYLEAGIMS GGVVSPRQEG TPQGGPLSPL LSNILLDELD RELERRGHRF VRYADDANIY VRSPRAGERV LVSVERFLRE RLKLTVNRKK SQVARAWKCD YLGYGMSWHQ QPRLRVARMS LDRLRDRLRM LLRSVRARKM ATVIERINPV LRGWASYFKL SQSKRPLEEL DGWVRHKLRC VIWRQWKQPP TRLRNLMRLG LSEERANKSA FNGRGPWWNS GAQHMNYALP KKLWDRLGLV SILDTINRLS RVT
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