Gene PP_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1218 
Symbol 
ID1045952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1395434 
End bp1395886 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content60% 
IMG OID637144618 
Producthypothetical protein 
Protein accessionNP_743378 
Protein GI26987953 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.339856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC AAAATCAGCT CGAACCGTTC GCACATCGGT GTCGCGTCTA TTACGAAGAT 
ACCGATGCGG GCGGCGTGGT GTATTACGTC AACTACCTGA AATTCATGGA GCGCGCGCGC
ACCGAACGCC TGCGGCACCT GGGCTTTTCC CAGTCGCAAC TGGCTGAAGA CAACCTGCTG
TTCGTGGTCC ATTCCAGCGA AGCGCGCTAT CACGCGCCGG CGCGGCTGGA TGACGAATTG
CGGGTGACCG CGCAGGTCCT TGAACTCAAT CGCGCCAGCT TGCGTTTCGT ACAGCAGGTC
TGGCGGGAAA AGGATGAAAC GCTGCTTTGC GAAGGGCAGT TCCTGGTGGC TGCCGTGCGC
GCCGACACTT TCAAACCCCG AGCCCTACCC CCCCAGCTGC GCGACGCCTT TGCGGCGGAC
GGCTCGGGTA ATCAATCGAA TGCAGGAGAA TAA
 
Protein sequence
MRAQNQLEPF AHRCRVYYED TDAGGVVYYV NYLKFMERAR TERLRHLGFS QSQLAEDNLL 
FVVHSSEARY HAPARLDDEL RVTAQVLELN RASLRFVQQV WREKDETLLC EGQFLVAAVR
ADTFKPRALP PQLRDAFAAD GSGNQSNAGE