Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1213 |
Symbol | aspS |
ID | 1046075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1390192 |
End bp | 1391967 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144613 |
Product | aspartyl-tRNA synthetase |
Protein accession | NP_743373 |
Protein GI | 26987948 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.352456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCA GCCATTATTG CGGCCAACTG AACGAGAGCC TGGACGGCCA GGAAGTCACC CTTTGCGGCT GGGTCCATCG TCGCCGCGAC CACGGCGGGG TGATCTTCCT CGACATCCGT GACCGCGAAG GCATGGCCCA GGTCGTGTTC GACCCGGATC GCGCCGAAAC CTTCGCTGCC GCCGACCGCG TGCGCAGCGA ATACGTCGTG CAGATCACCG GCAAGGTCCG CAAGCGTCCT GAAGGTGCAG TGAATGCCAA CATGGCTTCC GGTGCCATCG AGATCCTCGG CTACCAGCTG AACGTGCTCA ACGAAGCGGA AACCCCGCCG TTCCCCCTGA ACGAATACTC CGACGTCGGC GAGGAAACCC GCCTGCGTTA CCGCTTCATC GATCTGCGTC GCCCGGAAAT GGCCGACAAG CTGCGCCTGC GCTCGCGCAT CACCAGCAGC ATCCGTCGCT TCCTCGACGA AAACGGCTTC CTCGACGTCG AAACCCCGAT TCTCACCCGT GCCACCCCGG AAGGCGCCCG CGACTACCTG GTGCCAAGCC GTACCCACGC CGGTAGCTTC TTCGCCCTGC CGCAATCGCC ACAGCTGTTC AAGCAGCTGC TGATGGTCGC TGGCTTCGAT CGTTACTACC AGATCGCCAA GTGCTTCCGT GACGAAGACC TGCGTGCCGA CCGTCAGCCG GAATTCACCC AGATCGACAT CGAGACCAGT TTCCTCGATG AAAGCGAGAT CATGGGCCTG ACCGAAAGCA TGATCCGCAA GCTGTTCAAG GAAGTGCTCG ATCTGGAATT CGGCGAATTC CCGCACATGA CCTTCGAAGA GGCCATGCGC CGCTACGGCT CCGACAAGCC AGACCTGCGT ATTCCGCTGG AACTGGTCGA CGTTGCCGAC CAGCTGAAGG ATGTCGACTT CAAGGTGTTC GCCGGCCCGG CCAACGATCC GAAGTGCCGC GTTACCGCCC TGCGTCTGCC AGGTGGTGCC AGCATGCCGC GCAGCAAAAT CGACGAGTAC ACCAAGTTCG TTGGCATCTA CGGTGCCAAG GGCCTGGCCT ACATCAAGGT CAATGAGCGC GCCAAGGGTG TCGAAGGCCT GCAGTCGCCG ATCGTCAAGA ACATCCCTGA GGCCAACCTC AACAACATCC TCGACCGCGT GGGTGCCGTG GACGGCGACA TCGTGTTCTT CGGTGCCGAC AAGTTCAAGG TAGTCAGCGA AGCCCTGGGT GCGCTGCGTA TTCGTCTGGG TCACGACTTC GAGCTGCTGA CCTGCGAGTG GGCGCCGATG TGGGTCGTCG ACTTCCCGAT GTTCGAAGAG AACGAAGACG GCAGCTTCAC TGCATTGCAC CACCCGTTCA CCGCGCCGAA GTGCACCCCG GAAGAGCTCG AGGCCAACCC GGCCACTGCC CTGTCCCGTG CCTACGACAT GGTGCTGAAC GGTACCGAGC TGGGTGGCGG TTCGATCCGT ATCCACCGTA AAGAGATGCA ACAGGCGGTA TTCCGTCTGC TGGGTATCGA GGCAGAAGAA CAGGAAGAGA AGTTCGGCTT CCTGCTCGAC GCTCTGAAGT TCGGGGCACC GCCTCACGGT GGCCTGGCAT TCGGTCTGGA CCGTCTGGTC ATGCTGATGA CCGGCGCCCA GTCGATCCGT GAAGTGATCG CGTTCCCGAA AACCCAGAGC GCTGCATGCG TCATGACCCA GGCCCCTGGC ATGGTCGACG CCAAGGCCCT GCGCGAACTG CACATCCGAC TGCGCGAACA GACCAAGGTC GAGTAA
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Protein sequence | MMRSHYCGQL NESLDGQEVT LCGWVHRRRD HGGVIFLDIR DREGMAQVVF DPDRAETFAA ADRVRSEYVV QITGKVRKRP EGAVNANMAS GAIEILGYQL NVLNEAETPP FPLNEYSDVG EETRLRYRFI DLRRPEMADK LRLRSRITSS IRRFLDENGF LDVETPILTR ATPEGARDYL VPSRTHAGSF FALPQSPQLF KQLLMVAGFD RYYQIAKCFR DEDLRADRQP EFTQIDIETS FLDESEIMGL TESMIRKLFK EVLDLEFGEF PHMTFEEAMR RYGSDKPDLR IPLELVDVAD QLKDVDFKVF AGPANDPKCR VTALRLPGGA SMPRSKIDEY TKFVGIYGAK GLAYIKVNER AKGVEGLQSP IVKNIPEANL NNILDRVGAV DGDIVFFGAD KFKVVSEALG ALRIRLGHDF ELLTCEWAPM WVVDFPMFEE NEDGSFTALH HPFTAPKCTP EELEANPATA LSRAYDMVLN GTELGGGSIR IHRKEMQQAV FRLLGIEAEE QEEKFGFLLD ALKFGAPPHG GLAFGLDRLV MLMTGAQSIR EVIAFPKTQS AACVMTQAPG MVDAKALREL HIRLREQTKV E
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