Gene PP_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1186 
SymbolphoP 
ID1045864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1360935 
End bp1361612 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID637144583 
Productwinged helix family two component transcriptional regulator 
Protein accessionNP_743346 
Protein GI26987921 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TGGTGGTCGA GGACGAAGCC CTGCTTCGCC ATCACCTCTA CACCCGCCTG 
GGCGAAAGCG GCCATGTGGT CGAGGCGGTC GCTGATGCCG AAGAGGCGCT GTACCAGGCC
GAGCAGTACC ATTTCGACCT TGCCATCATC GACCTGGGCC TGCCCGGTAT CAGCGGCCTG
GAGCTGATCA CGCGCCTGCG CAGCCAGGAC AAGACCTTCC CCATTCTCAT CCTCACAGCC
CGTGGCAACT GGCAAGACAA GGTCGAGGGC CTGGCCGCCG GTGCCGACGA CTACCTGGTC
AAGCCGTTCC AGTTCGAGGA GCTTGAAGCA CGGCTCAATG CCCTGTTGCG CCGCTCCAGT
GGTTTCACCC AGTCGACCAT CGCCGCTGGC CCCTTGGTGC TTGACCTCAA CCGCAAGCAG
GCCACCCTCG ACGAACAAGC CTTGGCCCTG ACCGCCTACG AATACCGCAT CCTCGAATAC
CTCATGCGCC ATCACCAGCA GGTGGTGGCC AAGGATCGCC TGATGGAGCA GTTGTACCCA
GGAGACGAAG AGCGCGACCC CAATGTCATC GAAGTGCTGG TTGGCCGCCT GCGCCGCAAG
CTTGAAGGCG AGCGCGGCTT CAAACCCATC GACACGGTGC GCGGCCTGGG CTACCTGTTC
ACCGAGCGCT GCCGATGA
 
Protein sequence
MKLLVVEDEA LLRHHLYTRL GESGHVVEAV ADAEEALYQA EQYHFDLAII DLGLPGISGL 
ELITRLRSQD KTFPILILTA RGNWQDKVEG LAAGADDYLV KPFQFEELEA RLNALLRRSS
GFTQSTIAAG PLVLDLNRKQ ATLDEQALAL TAYEYRILEY LMRHHQQVVA KDRLMEQLYP
GDEERDPNVI EVLVGRLRRK LEGERGFKPI DTVRGLGYLF TERCR