Gene PP_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1182 
Symbol 
ID1045871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1356818 
End bp1358425 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content66% 
IMG OID637144579 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionNP_743342 
Protein GI26987917 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.955625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATT CGATCTTCCT GCGCATCTAC GGCGGCATGC TGGCCGTGCT GGTGCTGGTG 
GCCCTGCTTG GCGTGCTCAG CCTGCACCTG GTCAACGAAG TGCGCGCTGC CCAGCACCGC
GAGGGCCTGG CCCAGGGCAC TTTCAGCCTG ATGGCCGACA ACCTGGCAAT GCAGAATGAA
ACCCAACGCA AGCGTTCGCT GCTGATCTGG GAACGCCTGC TTGGCGTGCA GTTGGCGCTG
CAGCCGATGA GCGCACGCAG CCTTGACGGT GGCCAGCGGG CGCGCCTGTA CCGTGGCCTG
GTGGTGGTCG AGAAGATTGG CCCGCATGCG GCGCAAGTGC TACGCAAGGT GGGCCAGGAA
GACCTGATGC TGGTCGCGCA GATCAAACAG ATCAGCGAGC AGTTGGCGCG GGCCACCCTC
TATCTATTGG CCGACGAATT GGTGCGCTAC CCGGTAGCCG AACAGCAGCA GCGTCTGGCA
CAGATCAAGC AGGAAAAAGG CTTCGGCTTT GGCGTTGCCT TGCAACGTAT CGAGCGGGTC
AGCCTGGACG ATGACCAGCG GCGCCGGGTG GAGGAGGGCG ACACGGTGAT GGCGCTGGGC
AAGGATGGTG ACTCGATCCG GGTGTTCGCC GGGCTGACGG GCTCGCCATG GGTACTGGAA
ATCGGCCCGC TGTACCAGCT CAACCCTTAC CCGCCGCAGT TGCTGATCCT GATTGCCTTC
CTGGGGCTGT GCCTGATCGG CCTGGTGGTC TACCTGCTGG TGCGTCAGCT GGAACGTCGT
GTGTCGGGCC TGGAGATTGC TGCCACGCGC ATCGCCCAGG GCAGCCTGGA CACCCGCGTG
CCGGCCGGCG ACGCCGACTC GGTAGGGCGC CTGGCTGCTG CCTTCAATGG CATGGCCGAG
CACCTGCAGC GCTCGCTGAC CATGCAGCGC GAGCTGGTGC GAGCGGTGTC CCACGAGCTT
CGCACGCCGG TGGCGCGCCT GCGCTTTGGC TTGGAGATGA TCGAAAGCGC CACGACTGAA
CAGGTGCGGG CTAAGCATCT GGCGGGCATG GACGGGGATA TTCAGGACCT CGACAAGCTG
GTCGACGAGA TGCTGACCTA CGCCCGCCTG GAGCAGGGCG CACCGGCCTT GAAGTTCCAG
CGGGTCGATC TGGATGCCTT GCTCGATCGG GTGATCGAAG AGCTGGCACC TTTGCGTGCC
GAGGTGCGGG TTGTGCGCGG CGACTGCCAG GGCGCGGATG CCGAAGGCGC CTGGGTCGAG
GCCGAGCCGC GCTACTTGCA CCGGGCCCTG CAGAACCTTG TCGGCAATGC CATGCGCCAT
GCCGAGGGCG AAGTGCGCCT GAGCTATCAG CTGGGCCAGC AACGTTGCCG TATCGATGTG
GAGGATGACG GCCCGGGGAT CCCCGAGGGC TTCTGGGACC GCATCTTCAC GCCCTTCACC
CGCCTCGATG ACAGCCGTAC CCGTGCCTCG GGCGGGCACG GGTTGGGCTT GTCGATCGTA
CGGCGGATCA TCTACTGGCA CGCGGGCCGG GCCACAGTGG GCCGCAGCGA GGCGTTGGGC
GGTGCCTGCT TCAGCCTGAA CTGGCCAAGG CAGCAGGCAC CGCTGTAA
 
Protein sequence
MNNSIFLRIY GGMLAVLVLV ALLGVLSLHL VNEVRAAQHR EGLAQGTFSL MADNLAMQNE 
TQRKRSLLIW ERLLGVQLAL QPMSARSLDG GQRARLYRGL VVVEKIGPHA AQVLRKVGQE
DLMLVAQIKQ ISEQLARATL YLLADELVRY PVAEQQQRLA QIKQEKGFGF GVALQRIERV
SLDDDQRRRV EEGDTVMALG KDGDSIRVFA GLTGSPWVLE IGPLYQLNPY PPQLLILIAF
LGLCLIGLVV YLLVRQLERR VSGLEIAATR IAQGSLDTRV PAGDADSVGR LAAAFNGMAE
HLQRSLTMQR ELVRAVSHEL RTPVARLRFG LEMIESATTE QVRAKHLAGM DGDIQDLDKL
VDEMLTYARL EQGAPALKFQ RVDLDALLDR VIEELAPLRA EVRVVRGDCQ GADAEGAWVE
AEPRYLHRAL QNLVGNAMRH AEGEVRLSYQ LGQQRCRIDV EDDGPGIPEG FWDRIFTPFT
RLDDSRTRAS GGHGLGLSIV RRIIYWHAGR ATVGRSEALG GACFSLNWPR QQAPL