| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1074 |
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| Symbol | glpR |
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| ID | 1044730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1232927 |
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| End bp | 1233682 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637144469 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | NP_743235 |
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| Protein GI | 26987810 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCTGC CCCCCCGCCA ACAACAAATC CTCGAACTGG TACGCGAACG CGGCTATGTC
AGTATCGAGG AAATGGCGCA GCTGTTCGTT GTCACTCCCC AGACCATCCG ACGCGACATC
AATCAGCTTG CCGAGCTCAA CCTGCTGCGC CGTTACCACG GCGGCGCAGC TTACGACTCG
AGCATCGAGA ACACCGCCTA CGCCATGCGT GCCGACCAGA TGCGTGACGA AAAGCAGCGC
ATTGCCGACG CCGTAGCCCG GCAGATTCCC GACCATGCGT CGCTGTTCAT CAACATCGGC
ACCACCACCG AATCGATCGC ACGGGCGCTG CTCAACCACA GCCACCTGAA AGTCATCACC
AATAACTTGC ATGTGGCGGC GATCCTGGCC GCCAAGGACG ATTTCGAAGT GCTGGTGGCA
GGTGGCACGG TGCGCCGAGA TGGTGGTGTC GTCGGCCAGG CCAGTGTCGA TTTCATCAAC
CAGTTCAAGG TCGACTTCGC CCTGGTGGGC ATCAGCGGTA TCGACGAGGA TGGCAGCCTG
CTCGATTTCG ACTATCAGGA AGTGCGGGTG TCGCAAGCCA TCATTGCCAA TGCCCGGCAA
GTGATCCTCG CCGCCGACTC CAGCAAGTTC GGGCGCAATG CCATGGTGCG CCTGGGCTCG
ATCGACCTGG TCGACTGCCT GGTGACCGAC CGGACACCAA CCCCGGCCCT TACCCAATTG
TTGAACCAGA ACAAGATCAG GCTTGAGGTG GTCTGA
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| Protein sequence | MNLPPRQQQI LELVRERGYV SIEEMAQLFV VTPQTIRRDI NQLAELNLLR RYHGGAAYDS
SIENTAYAMR ADQMRDEKQR IADAVARQIP DHASLFINIG TTTESIARAL LNHSHLKVIT
NNLHVAAILA AKDDFEVLVA GGTVRRDGGV VGQASVDFIN QFKVDFALVG ISGIDEDGSL
LDFDYQEVRV SQAIIANARQ VILAADSSKF GRNAMVRLGS IDLVDCLVTD RTPTPALTQL
LNQNKIRLEV V
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