Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1027 |
Symbol | xseA |
ID | 1044154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1171671 |
End bp | 1173050 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637144422 |
Product | exodeoxyribonuclease VII large subunit |
Protein accession | NP_743188 |
Protein GI | 26987763 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.444658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAG ACCCTTTCGA ACGACTCGGG CTGGACCGCG AGGTCCTTAC CGTCAGCCAA CTCAACGGCC GCGCCCGCGT GCTGCTGGAA GACGTTTTCC GCAGCGTGTG GGTGGAAGGC GAAATCTCCA ACCTCGCCCG CCCGGCGTCC GGCCACATGT ACTTCACCCT CAAGGACAGC GGCGCCCAGG TGCGTTGTGC GTTGTTCCGG CAGAACGCCA CGCGGGTACG CCAGGCGCTG CGCGACGGCC TGGCGGTGCG GGTGCGTGGC AAGGTTTCGC TGTTCGAGGG GCGTGGCGAC TACCAGCTTA TTCTCGACAC CGTCGAGCCA GCCGGTGATG GCGCGCTGCG CCTGGCTTTC GAGGCCCTGA AGGAAAAGCT CGGGGCCGAG GGGCTGTTCA GCGCCGAACG AAAGAAGCCA CTGCCGGCTC ACCCGCAGCG CATCGGCATC ATCACCTCGC CCACTGGCGC GGTGATCCGC GACATCATCA GCGTGTTCGG CCGCCGTGCC CCGCAGGTGG AGCTGAACCT GATACCTACG GCGGTACAGG GCCGCGAAGC CATCGCGCAG ATCGTACGCG CCATCCGCCT GGCCGACAGC CTCGGCTTCG ATGCGCTGAT CCTGGCGCGG GGTGGGGGTT CGCTGGAAGA CCTGTGGTGT TTCAACGAGG AAGCCGTGGC GCGTGCCGTG GCCGCCTGCG TCACGCCGAT TGTCAGCGCC GTGGGCCATG AAACCGACGT GTCGATCAGC GACTTCGTGG CTGACGTGCG CGCGCCCACC CCGTCTGCGG CCGCCGAGCT GCTGGCCCCT GACAACAGCG GCCTTCGGCA ACGCCTGGAT GGCCTGCAAC GGCGCCTGCT GCTGCGCATG CAGAACCGCC TGACCCACGA CCGCCTGCGC CTGGAGTCAC TCACCCGGCG CCTGCGCCAC CCAGGCGAGC GTTTGCGCCA GCGGGCTCAA CGCCTGGACG ACCTGGACAT GCGCCTGCGT CGCGCGTTCA TGCTCAACCT CAACCAGCGC CGCGAACGCC TGGCACGCCT GGACGCCCGC CTGGCCGCGC AGCATCCGGG GCGTAACCTG AAACTGCTGA ACCAGCGCCT GGACAGCCTG GCCGAGCGCC TGCCACGGGC CATGCGCGAG GTGCTCAAGG ACCGTCGCCA GCGGTTCCAG GCCCAGTTGC AGACACTGCA GGTGGTCAGT CCGCTGGCCA CTCTGGCCCG TGGATACAGC ATTTTGCTGG ATGAGCAAGG CCAGGCCATT CGCAGCGCCG AACAGACCCG CAATGGCCAA CGCCTGACCG CCCGCCTGAA CGAAGGCGAG TTGCTGGTGC GGGTCGAAGA CAACCACCTG ACCCCGGTCA CCCTCTCACT ACTGGACTGA
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Protein sequence | MIKDPFERLG LDREVLTVSQ LNGRARVLLE DVFRSVWVEG EISNLARPAS GHMYFTLKDS GAQVRCALFR QNATRVRQAL RDGLAVRVRG KVSLFEGRGD YQLILDTVEP AGDGALRLAF EALKEKLGAE GLFSAERKKP LPAHPQRIGI ITSPTGAVIR DIISVFGRRA PQVELNLIPT AVQGREAIAQ IVRAIRLADS LGFDALILAR GGGSLEDLWC FNEEAVARAV AACVTPIVSA VGHETDVSIS DFVADVRAPT PSAAAELLAP DNSGLRQRLD GLQRRLLLRM QNRLTHDRLR LESLTRRLRH PGERLRQRAQ RLDDLDMRLR RAFMLNLNQR RERLARLDAR LAAQHPGRNL KLLNQRLDSL AERLPRAMRE VLKDRRQRFQ AQLQTLQVVS PLATLARGYS ILLDEQGQAI RSAEQTRNGQ RLTARLNEGE LLVRVEDNHL TPVTLSLLD
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