Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1025 |
Symbol | leuA |
ID | 1044236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1168734 |
End bp | 1170407 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144420 |
Product | 2-isopropylmalate synthase |
Protein accession | NP_743186 |
Protein GI | 26987761 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.226688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGC TCAAAGACCC TTCGAAGAAA TACCGCGCTT TCCCGACCAT CGACCTGCCT GACCGTACCT GGCCGTCGAA GACCATCACC CAGGCACCTA TCTGGTGCAG TTCCGACCTG CGTGACGGCA ACCAGTCGCT GATAGAGCCG ATGGACTCGG AGAAGAAACT GCGCTTCTGG AAGACCTTGG TGCAGGTTGG CGTGAAGGAG ATCGAAGCCT CGTTCCCGTC TGCCTCGCAA ACCGATTTCG ACTTCGTGCG CACCCTGATC GAGGACGGCC ACATCCCGGA TGACACCACC ATCCAGGTGC TCACCCAGGC ACGTGAAGAC CTGATTGCCC GTACCTTCGA ATCACTGCGC GGTGCGAAGA AGGCCATCGT CCACCTGTAC AACGCCACCA GCCCGTCGTT CCGCCGCATC GTCTTCAATC AGGACAAGCA AGGCGTGAAG GACATCGCGG TGAACGCGGC CAAGCTGTTC GTCAAGTACG CCGCCCAGCA GCCGGAAACC CAGTGGACCT TCCAGTACTC GCCAGAAACC TTCAGCGCCA CTGAAATGGA GTTCGCCAAG GAGGTCTGCG ACGCGGTCAT CGAGGTGTGG AACCCTACCC CTGAACACAA GATCATCCTC AACCTGCCGG CCACCGTGGA AGTGTCCACG CCAAATATCT ACGCCGACCA GATCGAGTGG TTCTGCCGCA ACGTCAGCCG CCGCGACAGC GTGATCATCA GCCTGCACTG CCACAACGAC CGCGGCACCG GCATCGCTGC CACCGAACTG GGCCTCATGG CCGGCGCCGA CCGTGCCGAA GGCTGCCTGT TCGGCAACGG CGAGCGTACC GGTAACGTCG ACCTGGTGAC CTTGGCACTG AACCTCTACA CCCAGGGCAT CGACCCGTTG CTGGACTTCT CCGACATCGA CGGCGTGCGC AAGGTGGTCG AAGAATGCAA CCAGTTGCCG GTACATCCTC GTCACCCCTA TGTGGGGGAT CTGGTCCATA CCGCGTTCTC CGGCTCGCAC CAGGACGCCA TCCGCAAGGG CTTCGCCAAG CAGCAGGATG GGGAACTGTG GGAGGTGCCT TACCTGCCGA TCGACCCGGC CGACATCGGC CGCAGCTACG AAGCGGTAAT CCGCGTCAAC AGCCAGTCGG GCAAAGGCGG TATCACCTAC CTGCTCGAGC AGGAATATGG CATCAGCCTG CCGCGTCGCA TGCAGATCGA ATTCAGCCAG GTGGTGCAGG GTGAGACTGA CCGCCTGGGC CTGGAAATGA CCGCCCAGCA GATCTACAGC CTGCTGCACA AGGAATACCT CCAGGCCAAC GCGCCATATG CACTGGTCAG CCATCGCCTG CAGGAAGAAA ACGGCCACAG CGCCGTGGAA GTGGAAGTTG CCGGTGAAGG CGAAACCACC CTGCACTGGC GCGGCAAGGG CAACGGCGCC CTGGAAGCAC TGGTGGCCGG CCTGCCGATT GCCGTGGAGA TCATGGACTA CAACGAGCAT GCGATTGGCG CTGGCACCAA TGCCAAGGCA GCTGCCTACA TCGAACTGCG CGTGGCCGGT GGCCGCCCGG TACATGGCGT GGGTATCGAT GAGAACATCA CCACGGCCAG CTTCAAGGCG CTGTTCAGTG CGCTGAACCG CTCGCTGAGC CAGCAGGAAG CCAAGGCGGC CTGA
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Protein sequence | MTMLKDPSKK YRAFPTIDLP DRTWPSKTIT QAPIWCSSDL RDGNQSLIEP MDSEKKLRFW KTLVQVGVKE IEASFPSASQ TDFDFVRTLI EDGHIPDDTT IQVLTQARED LIARTFESLR GAKKAIVHLY NATSPSFRRI VFNQDKQGVK DIAVNAAKLF VKYAAQQPET QWTFQYSPET FSATEMEFAK EVCDAVIEVW NPTPEHKIIL NLPATVEVST PNIYADQIEW FCRNVSRRDS VIISLHCHND RGTGIAATEL GLMAGADRAE GCLFGNGERT GNVDLVTLAL NLYTQGIDPL LDFSDIDGVR KVVEECNQLP VHPRHPYVGD LVHTAFSGSH QDAIRKGFAK QQDGELWEVP YLPIDPADIG RSYEAVIRVN SQSGKGGITY LLEQEYGISL PRRMQIEFSQ VVQGETDRLG LEMTAQQIYS LLHKEYLQAN APYALVSHRL QEENGHSAVE VEVAGEGETT LHWRGKGNGA LEALVAGLPI AVEIMDYNEH AIGAGTNAKA AAYIELRVAG GRPVHGVGID ENITTASFKA LFSALNRSLS QQEAKAA
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