Gene PP_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1000 
SymbolargI 
ID1044931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1138632 
End bp1139642 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content60% 
IMG OID637144395 
Productornithine carbamoyltransferase 
Protein accessionNP_743161 
Protein GI26987736 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0078] Ornithine carbamoyltransferase 
TIGRFAM ID[TIGR00658] ornithine carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCA ACATTCACAA CCGCAACTTG CTCAGCCTGG AACACCACAC CACCCGTGAG 
TTGCGCTACC TGCTGGACCT GTCCCGCGAC CTCAAGCGCG CCAAGTACAC GGGCACCGAG
CAGCAGCACC TGAAGGGCAA CAACATCGCC CTGATCTTCG AAAAAACCTC CACCCGTACC
CGTTGTGCCT TCGAAGTCGC AGCCTATGAC CAAGGCGCCA ACGTCACCTA CATCGACCCC
AACTCCTCGC AGATCGGCCA CAAGGAAAGC ATGAAGGACA CCGCCCGTGT GCTCGGGCGC
ATGTATGACG CCATCGAGTA CCGTGGCTTC AAGCAGGAAA TCGTCGAAGA GCTGGCCAAG
TTCGCCGGCG TACCGGTGTT CAACGGCCTG ACCGACGAAT ACCACCCGAC CCAGATGATC
GCCGACGTGC TGACCATGCG TGAGCACAGC GACAAGCCGC TGCACGACAT CAGCTACGCC
TACCTGGGCG ATGCCCGCAA CAACATGGGC AACTCGCTGC TGCTGATCGG CGCCAAGCTG
GGCATGGATG TGCGCATCGC CGCGCCCAAG GCACTGTGGC CACATGACGA CCTGGTCGAG
CGCTGCAAGC AGTACGCTGA AGAAAGCGGC GCACGCATTA CCCTCACCGA AGACCCGAAA
GCCGCGGTCA AGGGTGTCGA CTTTGTGCAT ACCGACGTGT GGGTATCGAT GGGCGAGCCG
ATCGAAGCCT GGGGTGAGCG CATCAAGCAG CTCAAGCCTT ATCAGGTGAA TGCCGAACTG
ATGAAGTCCA CCGGTAACCC ACGGACCAAG TTCATGCACT GCCTGCCGGC ATTCCACAAC
TCCGAAACCA AGGTAGGCAA GCAGATCGCC GAACAATACC CGGACCTGGC CAACGGCATC
GAAGTGACCG ATGACGTGTT CGAGTCGCCA GCGTGCATCG CCTTCGAGCA GGCGGAAAAC
CGCATGCACA CGATCAAGGC GATCCTGGTA TCGACCCTGG CTGATCTATA A
 
Protein sequence
MAFNIHNRNL LSLEHHTTRE LRYLLDLSRD LKRAKYTGTE QQHLKGNNIA LIFEKTSTRT 
RCAFEVAAYD QGANVTYIDP NSSQIGHKES MKDTARVLGR MYDAIEYRGF KQEIVEELAK
FAGVPVFNGL TDEYHPTQMI ADVLTMREHS DKPLHDISYA YLGDARNNMG NSLLLIGAKL
GMDVRIAAPK ALWPHDDLVE RCKQYAEESG ARITLTEDPK AAVKGVDFVH TDVWVSMGEP
IEAWGERIKQ LKPYQVNAEL MKSTGNPRTK FMHCLPAFHN SETKVGKQIA EQYPDLANGI
EVTDDVFESP ACIAFEQAEN RMHTIKAILV STLADL