Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0966 |
Symbol | hisD |
ID | 1044886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1105519 |
End bp | 1106844 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144361 |
Product | histidinol dehydrogenase |
Protein accession | NP_743127 |
Protein GI | 26987702 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.329696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGT CCACTGCAAT TGCCCGTCTC AACGCCGCTG ATCCGGATTT CGCCCGACAT CTGGATCATC TGCTGAGCTG GGAAAGTGTG TCCGATGACG CGGTCAATCA GCGCGTGCTC GACATCATCA AGGCCGTGCG TGAACGCGGT GATGCGGCGC TGGTGGAATT CACCCAGCGT TTCGATGGTG TTGACGCCAA GTCGATTGAC GACCTGATCC TCGATCGCGC GCGCCTGGAA CTGGCGCTGA CCCGTATTAC CCCGGTCCAG CGCGAGGCCC TGGAAAAGGC CGCCAACCGT GTGCGCATTT ATCACGAGCG GCAGAAGCAG GATTCCTGGC AGTACACCGA GGCCGACGGC ACCGTGCTCG GCCAGAAGGT CACCCCGCTG GACCGTGCTG GCCTGTATGT GCCGGGCGGC AAGGCGTCGT ACCCGTCGTC GGTGCTGATG AACGCCATCC CGGCCAAGGT TGCCGGCGTG ACTGAAGTGG TGATGGTGGT GCCGACCCCG CGGGGTGAGG TCAACGAGCT GGTACTGGCG GCTGCCTGCA TCGCTGGTGT CGACCGGGTG TTCACCGTCG GTGGCGCCCA GGCCGTGGCT GCGCTGGCCT ACGGGACTGA AAGCGTGCCG CAGGTGGACA AGATCGTCGG CCCGGGCAAC ATCTACGTTG CCACCGCCAA GCGCCACGTG TTCGGCCAGG TAGGCATTGA CATGATCGCC GGCCCCTCGG AAATTCTCGT GGTGTGCGAC GGCCAGACCG ACCCGGACTG GATCGCCATG GACCTGTTCT CCCAGGCCGA GCACGACGAA GACGCCCAGG CCATCCTGGT CAGCCCGGAT GCTGCTTTCC TCGATCGCGT GGCTGCCAGC ATCGACAAGC TGATGCCGAC CATGGAACGT GCCGATATCA TCGAGAAGTC GATCAATGGC CGTGGTGCGC TGATCCAGGT GCGTGACATG CAGCAGGCCA TGGACGTGGC CAACCGCATC GCACCGGAGC ACCTGGAGCT GTCGGTGGCC GACCCTCAAG CCTGGCTGCC ACACATTCGT CACGCTGGCG CGATCTTCAT GGGCCGCCAC ACCAGCGAAG CGCTGGGCGA TTACTGCGCT GGCCCTAACC ACGTGCTGCC CACTTCAGGT ACCGCGCGTT TTTCGTCGCC GCTGGGGGTG TATGACTTCC AGAAGCGTTC GTCGATCATC TTCTGCTCCG AACAGGGCGC GTCCGAACTG GGCCACACTG CCTCGGTCCT GGCCCGTGGC GAGTCGCTGA CCGCCCACGC CCGCAGCGCT GAATACCGTA TTTTGACCCA AGAGAAGGGG AACTGA
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Protein sequence | MTVSTAIARL NAADPDFARH LDHLLSWESV SDDAVNQRVL DIIKAVRERG DAALVEFTQR FDGVDAKSID DLILDRARLE LALTRITPVQ REALEKAANR VRIYHERQKQ DSWQYTEADG TVLGQKVTPL DRAGLYVPGG KASYPSSVLM NAIPAKVAGV TEVVMVVPTP RGEVNELVLA AACIAGVDRV FTVGGAQAVA ALAYGTESVP QVDKIVGPGN IYVATAKRHV FGQVGIDMIA GPSEILVVCD GQTDPDWIAM DLFSQAEHDE DAQAILVSPD AAFLDRVAAS IDKLMPTMER ADIIEKSING RGALIQVRDM QQAMDVANRI APEHLELSVA DPQAWLPHIR HAGAIFMGRH TSEALGDYCA GPNHVLPTSG TARFSSPLGV YDFQKRSSII FCSEQGASEL GHTASVLARG ESLTAHARSA EYRILTQEKG N
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