Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0931 |
Symbol | gatA |
ID | 1044835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1073402 |
End bp | 1074853 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637144326 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | NP_743092 |
Protein GI | 26987667 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.622396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCAAT TGACCCTGGC CGAGATCGCC CGCGGACTCG CCGACAAATC GTTTTCTTCC GAAGAGCTGA CCGGCGCCCT GCTGGCGCGC ATCAAGCAGC TCGACCCACA GATCAACAGC TTCATCAGCG TCACCGAAGA CCTGGCCCTG GGCCAGGCGC GTGCCGCCGA TGCCCGTCGC GCCGCGGGCG AAACCAGCGC GCTGCTGGGT GCACCGATCG CCCACAAAGA CCTGTTCTGC ACCAACGGCG TACGCACCAG CTGCGGCTCG AAGATGCTCG ACAACTTCAA GGCGCCCTAT GACGCCACCG TGGTCGCCAA GCTGGCGGAA GCCGGCATGG TCACCCTGGG CAAGACCAAC ATGGACGAGT TCGCCATGGG TTCGGCCAAC GAATCCAGCC ATTACGGCGC GGTGAAGAAC CCGTGGAACC TCGAGCACGT TCCGGGCGGG TCGTCCGGTG GTTCGGCCGC TGCCGTGGCC GCGCGTCTGC TGCCCGCCAC CACGGGCACC GACACCGGCG GCTCGATCCG CCAGCCAGCG GCACTGACCA ACCTCACCGG CCTCAAGCCG ACGTACGGTC GTGTGTCGCG CTGGGGCATG ATCGCCTACG CCTCCAGCCT CGACCAGGGC GGCCCACTGG CCCGCACCGC CGAGGACTGC GCGCTGCTGC TGCAAGGTAT GGCCGGTTTC GACGCCAAGG ACTCCACCAG CATCGAAGAA CCGGTGCCGG ACTACAGCGC CAGCCTGAAC GCTTCGCTGC AGGGCCTGCG CATCGGCCTG CCGAAAGAGT ACTTCGGTGC CGGTCTAGAC CCACGCATCG CCGACCTGGT CCAGGCCAGC GTCAAAGAGC TGGAAAAGCT CGGCGCAGTG GTCAAGGAAA TCAGCCTGCC GAACATGCAG CATGCCATTC CGGCCTACTA CGTGATCGCT CCGGCTGAAG CCTCTTCCAA CCTGTCGCGT TTCGACGGCG TACGCTTCGG CTACCGCTGT GAAGAGCCCA AAGACCTCAC CGACCTGTAC AAGCGCTCCC GCGGCGAAGG GTTCGGCGTT GAAGTACAGC GGCGCATCAT GGTCGGTACC TACGCCCTGT CGGCCGGCTA CTACGACGCC TATTACGTGA AGGCGCAGCA AATCCGCCGC CTGATCAAGA ACGACTTCAT GGCCGCCTTC AACGATGTCG ACCTGATTCT CGGCCCGACC ACGCCAAACC CGGCCTGGAA GCTTGGCGCC AAGAGCAGCG ACCCGGTTGC CGCCTATCTC GAAGACGTCT ACACCATCAC CGCCAACCTG GCGGGCCTGC CAGGCCTGTC GATGCCTGCG GGCTTCGTCG ACGGCCTGCC GGTCGGCGTG CAACTGCTGG CGCCGTACTT CCAGGAAGGC CGCCTGCTCA ACGTCGCGCA CCGCTACCAA CAGGTGACCG ACTGGCATAC CCGCGCCCCC AACGGCTTCT GA
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Protein sequence | MHQLTLAEIA RGLADKSFSS EELTGALLAR IKQLDPQINS FISVTEDLAL GQARAADARR AAGETSALLG APIAHKDLFC TNGVRTSCGS KMLDNFKAPY DATVVAKLAE AGMVTLGKTN MDEFAMGSAN ESSHYGAVKN PWNLEHVPGG SSGGSAAAVA ARLLPATTGT DTGGSIRQPA ALTNLTGLKP TYGRVSRWGM IAYASSLDQG GPLARTAEDC ALLLQGMAGF DAKDSTSIEE PVPDYSASLN ASLQGLRIGL PKEYFGAGLD PRIADLVQAS VKELEKLGAV VKEISLPNMQ HAIPAYYVIA PAEASSNLSR FDGVRFGYRC EEPKDLTDLY KRSRGEGFGV EVQRRIMVGT YALSAGYYDA YYVKAQQIRR LIKNDFMAAF NDVDLILGPT TPNPAWKLGA KSSDPVAAYL EDVYTITANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHRYQ QVTDWHTRAP NGF
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