Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0882 |
Symbol | dppA |
ID | 1044764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1022076 |
End bp | 1023710 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637144277 |
Product | dipeptide ABC transporter, periplasmic dipeptide-binding protein |
Protein accession | NP_743043 |
Protein GI | 26987618 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAG GGAGTTTTCA ACACATGCAC AGAGCTTTCA TGAAATCGCG GCCGTTGCGC CTAGCCCTGG TCGCGCTGCT TCTGGGCGGC GCCACGCAAC TGGCGGCCAA GCCGCTGGTG GTGTGTACAG AAGCTAGCCC GGAAGGGTTC GACATCGTCC AGTACACCAC CGCAGTCACC GCCGATGCCT CGGCCGAGAC AGTGTTCAAC CGCCTGGTCG ACTTCAAACC CGGCACCACC GAGATCCAGC CAGCCCTGGC CGAGCGCTGG GACATTTCAG CCGACGGCCT GACCTACACC TTCCATCTGC GTCAGGGGGT GAAGTTCCAC ACCACCGACT ACTTCAAGCC CACCCGTGAC TTGAACGCCG ATGACGTGCT GTGGAGCCTC AATCGCCAGC TCGACCCGAA CCACCCCTGG CATGACAAGA CCAGCGTCGG CTACCCGTAC TTCGAAAGCA TGGGGTTCAA GGAACTGCTC AAGTCGGTCA GCAAGGCTGA CGAGCACACC GTGGTGATTA CCCTCAGCCG ACCGGAAGCG CCGTTCCTGC GCGACATGGC CATGGGCTTT ACCTCGATCT ACTCCGCCGA ATACGGCGAC CAGTTGCTCA AGTCTGGCAA GACCGCCGAG CTGAACAGCA AGCCGATCGG CACCGGCCCT TTCATCTTCC AGCGTTACAA CAAGGACGCC CAGGTCCGCT TCAAGCCCAA CCCGGACTAT TTCCGCGGCA AGCCGCCGGC CGATGCGCTG GTGTTCGCCA TCGCCATCGA CAGCAACGTG CGCCTGCAGA AACTGCGCGC CAACGAGTGC CAGGTGGCGC TCTATCCCAA GCCCGATGAC GTGCCATCGA TCAAGCAAGA CCCGAAACTC AAGGTTGAAG AAATCGAGGC CCTGGTCACC GGCTACATCG CCATGAATAC CCAGCACAAA TACCTCAACG ACGTGCGCGT GCGTAAAGCC ATCAACATGG CCTTCGACCG CCAGACCCAT GTCGACCAAC TGTTTGGCAA AGGCAACGCA CTGGTGGGTG TAAACCCTTA CCCACCCACC ATGATCGGCT ACAACACCCA TAACCAGAAC CCACCGCGCG ACCTCGATAA AGCCCGCGCA CTGCTCAGCC AGGCCGGTGT ACCCGAGGGC ACGGTAATCA CCCTGTTCAC CCGCAACGGC GGCGGCCCGA CCAACCCCAA CCCGCGCCTG TCTGCCGAGA TGCTGCAGGC CGATCTCAAA CAGATCGGCC TCAAGCTGGA TATCCGCGTC ATGGAATGGG CCGAGATGCT GCGCCGGGCG AAGAACGGCG AAGCCGACCT GGTGTCCACC GGCTGGGCCG GCGACAACGG CGACCCGGAC AACTTCCTCA GCCCACTGCT CAGTTGCGAT GCCGTGAAAA GTGGCGAGAA CTATGCGCGC TGGTGCAACC CCAAGTTCCA GGAGCTGATC AGCCGCGCCC GCGAAGTGAT CGACAACGAC GAGCGTGCAA GGCTCTATAA CGAGGCATTG AAAGTGTACG ATGACGAACA ACCCTGGATC AGCATGGCTC ATCCAAAGAT GTTCACCGCC ATGCGTGACA ACGTGGAGGG CTACGTGATC AACCCTCTGA CCAACAACAA CTTCGCCACC ACCAAGGTGA AGTAG
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Protein sequence | MQAGSFQHMH RAFMKSRPLR LALVALLLGG ATQLAAKPLV VCTEASPEGF DIVQYTTAVT ADASAETVFN RLVDFKPGTT EIQPALAERW DISADGLTYT FHLRQGVKFH TTDYFKPTRD LNADDVLWSL NRQLDPNHPW HDKTSVGYPY FESMGFKELL KSVSKADEHT VVITLSRPEA PFLRDMAMGF TSIYSAEYGD QLLKSGKTAE LNSKPIGTGP FIFQRYNKDA QVRFKPNPDY FRGKPPADAL VFAIAIDSNV RLQKLRANEC QVALYPKPDD VPSIKQDPKL KVEEIEALVT GYIAMNTQHK YLNDVRVRKA INMAFDRQTH VDQLFGKGNA LVGVNPYPPT MIGYNTHNQN PPRDLDKARA LLSQAGVPEG TVITLFTRNG GGPTNPNPRL SAEMLQADLK QIGLKLDIRV MEWAEMLRRA KNGEADLVST GWAGDNGDPD NFLSPLLSCD AVKSGENYAR WCNPKFQELI SRAREVIDND ERARLYNEAL KVYDDEQPWI SMAHPKMFTA MRDNVEGYVI NPLTNNNFAT TKVK
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