| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0876 |
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| Symbol | |
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| ID | 1044756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1016279 |
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| End bp | 1017103 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144271 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | NP_743037 |
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| Protein GI | 26987612 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00939857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTATC CACCCATGAT CGCCACCACC CTCCCCGACG GCCCCGAGCA AACCCCGCTT
ACCGCCGAAA TCGTGCTGCG CTACCACCTC TGCTGGAAGC ATCGCGACCT CGACGGTGTC
ATGGCGCTCT ACCACCCCGA TATCCAGTAC CACGACTTCT TTCAGAACCG CGTGCTCGGC
CATCAGGAAC TGCGCGACTA CGTACGCGCC TGCCTGCCCC ATGAAGCCGG CGAGGACATC
GTCCACAGCG ACCGCATCCG CGTCGATGGC AGCACCGCAT TCATCCAGTA TCAGGTCACG
GTCCAGGGCG GTGACGGCCT GGTTGCGTTC CAGTCCAGCG AGGCGATCAC CGTCAGGGAC
GGGCTGATCT GGCGGGTCAA CGAATACGCC ACGCTGGTCC GCCAGAACGG CACAGGCCAC
GCCAACAGCG GTCCGCGCCC CGCCACCAGC CGCCTGGGCT TGTCGCCTCG GCAGTTGTCG
ACCATGGCCC AGGACCTGGA GCATTACTTC CGGCGTCAAC GCCCCTACCT CGACCCGGAG
CTCGACCTGC AACAGGTCGC CGACGCCAGC GGCTACAGCC GCAACCAGAT TTCCTACCTG
CTCAACCAGG TGCTGGGGCA AAGCTTCTAC CGCTACGTCA ACCAGGCACG CCTGCAGCAC
CTGATGGCCA GCCTCGGCGA CGACAGCGTC GAGGCGACGA TCGACGAGCT GGCCTTCAGT
GCCGGCTTCA ACTCGCTGTC GGCGTTCTAC AAGTGCTTCC GCGAACACAC CGGGTTCACG
CCCAAGGCCT ACCTGAAGCA AATTTCCCTG CGTGCACGCA CGTAA
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| Protein sequence | MHYPPMIATT LPDGPEQTPL TAEIVLRYHL CWKHRDLDGV MALYHPDIQY HDFFQNRVLG
HQELRDYVRA CLPHEAGEDI VHSDRIRVDG STAFIQYQVT VQGGDGLVAF QSSEAITVRD
GLIWRVNEYA TLVRQNGTGH ANSGPRPATS RLGLSPRQLS TMAQDLEHYF RRQRPYLDPE
LDLQQVADAS GYSRNQISYL LNQVLGQSFY RYVNQARLQH LMASLGDDSV EATIDELAFS
AGFNSLSAFY KCFREHTGFT PKAYLKQISL RART
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