Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0873 |
Symbol | |
ID | 1044751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1013301 |
End bp | 1014380 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637144268 |
Product | periplasmic polyamine-binding protein, putative |
Protein accession | NP_743034 |
Protein GI | 26987609 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.262615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCT TCCTCCTCGC CCCCCTGATG CTGGCCGCCA GCGTGGCCAG CGCCGCTGAA ACGGTGAAGA TCTACAACTG GTCCAGCTAC GTGGCCCCCG ATACGTTGAA AAACTTCCAG CAAGCCAGCG GCATCGTGCC GACCTATGAC GTGTACGACA GCAATGAAAC CCTCGATGGC AAGTTGATGA CCGGCAATTC CGGCTACGAC GTGGTGTTCC CCTCCAACCA TTTCATGGCC CGGCAGATCC AGGGCAAGGC CTTGAAGCGC CTGGACAAAT CCAAGCTGCC TAACTGGCAC AACCTCAACC CGGTGCTGCT CAAGGCGCTG GAGGTGAACG ACCCGGGCAA CCAGTACGGC TTCCCGTACC TGTGGGGCAG TACCGGTATT GGCTACAACA TCGACAAGGT CAAGGCGGTG CTCGGCGACA ACGCGCCCGT GGACTCCTGG GACCTGATCT TCAAGCCCGA GTACATGAGC AAGCTGAAAA GCTGTGGCGT CGCGGTGCTG GACAATGGCC CCGAACTGCT GCCGATCGCC CTGCACTACC TGGGCTTGCC CCATCACAGC CAAGACCCCA AGGACTACGA GAAGGCCAAG GACCTGCTGA TGAAAGTGCG GCCTTACATC AGCTATTTCC ACTCGTCCAA GTACACGGGC GACCTGGCCA ACGGCGATAT CTGCGTGGTA GTGGGGTTCT CAGGGGATGT GCTGCAGGCG AAGAACCGCG CCGACGAGGC GAACAATGGC GTGAAGGTGG GCTATTCGAT ACCCAAGGAG GGCGCGCCGA TGTGGTTCGA CATGGTTGCC ATGCCCGTCG ATGCGCCGGA TGAAAAGGCC GGATATGCCT ACATGAACTA CCTGCTGCAG CCGGAAGTGA TGGCCAACAT CAGCAACCAC GTCCAGTACG CCAACGGCAA CCTCAAGGCG GACGGGCTGG TGGACCCGGC GATGAAGGGT AATACGATGA TTTACCCGAG CGACGAGGTG ATGGGCAAGC TGTATGCGCT GGAGGCGATG CCGGCGAAGA TCGACCGTAT TCGTACGCGA ATCTGGACCA GTATCAAAGC CGGAAATTGA
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Protein sequence | MRTFLLAPLM LAASVASAAE TVKIYNWSSY VAPDTLKNFQ QASGIVPTYD VYDSNETLDG KLMTGNSGYD VVFPSNHFMA RQIQGKALKR LDKSKLPNWH NLNPVLLKAL EVNDPGNQYG FPYLWGSTGI GYNIDKVKAV LGDNAPVDSW DLIFKPEYMS KLKSCGVAVL DNGPELLPIA LHYLGLPHHS QDPKDYEKAK DLLMKVRPYI SYFHSSKYTG DLANGDICVV VGFSGDVLQA KNRADEANNG VKVGYSIPKE GAPMWFDMVA MPVDAPDEKA GYAYMNYLLQ PEVMANISNH VQYANGNLKA DGLVDPAMKG NTMIYPSDEV MGKLYALEAM PAKIDRIRTR IWTSIKAGN
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