| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0836 |
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| Symbol | secF |
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| ID | 1044696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 973580 |
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| End bp | 974488 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637144231 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | NP_742997 |
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| Protein GI | 26987572 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.885534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCA TCAATTTCAT GGGTGTGCGC AATGTCGCGT TCGCCGTCAC CGTGCTCCTC
ACCGTGTTGG CGCTGTTCAG CTGGTGGCAA AAGGGCCTGA ACTTCGGGCT GGACTTCACC
GGGGGTACGC TGATCGAGCT GACCTACGAG CGCCCGGCCG ACGTCAAGGC TGTGCGTGCC
GAGTTGGTCG AATCCGGCTT CAACGAGGCC GTGGTGCAGA GCTTCGGTGC TACCACTGAC
CTGCTTGTGC GCATGCCTGG CGACGATCCC ATGCTGGGTA ACAAGGTAGC TGAAGCCCTG
CAGAAGGCTG GAGGTGACAA CCCGGCGAAG GTCAAGCGTG TCGAGTTCGT CGGCCCTCAG
GTGGGTGAAG AGCTGCGTGA CCAGGGTGGC ATAGGCATGT TGCTGGCCTT GGGCGGCATC
CTCATCTACC TGGCGTTCCG TTTCCAGTGG AAGTTCGCCG TGGGGGCGAT CGTTTCGCTG
ATCCACGACG TGGTGGTAAC GCTGGGTATC CTGTCGTTCT TCCAGATCAC CTTCGACCTG
ACGGTGCTGG CGGCGGTGCT GGCGATCATC GGTTACTCGC TGAACGACAC CATCGTTGTG
TTCGACCGGG TACGTGAAAA CTTCCGCGTC ATGCGCAAGG CCTCATTGAT CGAGAACATC
AACGTTTCCA CCACCCAGAC CCTGCTGCGT ACCGTCGCCA CTTCGGTTTC GACCTTGCTG
GCCATTGCCG CGCTGCTGTT CTTCGGGGGT GACAACCTGT TCGGTTTCTC GTTGGCCCTG
TTCATTGGTG TCATGGCCGG TACCTACTCG TCGATCTATA TCGCCAACGT GGTACTGATC
TGGCTGAACC TGAGCAGCGA GGATCTCATT CCGCCGGTCA AGGCCGAAGG TGTGGACGAA
CGTCCGTAG
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| Protein sequence | MKTINFMGVR NVAFAVTVLL TVLALFSWWQ KGLNFGLDFT GGTLIELTYE RPADVKAVRA
ELVESGFNEA VVQSFGATTD LLVRMPGDDP MLGNKVAEAL QKAGGDNPAK VKRVEFVGPQ
VGEELRDQGG IGMLLALGGI LIYLAFRFQW KFAVGAIVSL IHDVVVTLGI LSFFQITFDL
TVLAAVLAII GYSLNDTIVV FDRVRENFRV MRKASLIENI NVSTTQTLLR TVATSVSTLL
AIAALLFFGG DNLFGFSLAL FIGVMAGTYS SIYIANVVLI WLNLSSEDLI PPVKAEGVDE
RP
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