Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0828 |
Symbol | |
ID | 1044685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 965821 |
End bp | 966792 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144222 |
Product | hypothetical protein |
Protein accession | NP_742989 |
Protein GI | 26987564 |
COG category | [S] Function unknown |
COG ID | [COG3781] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00926098 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGCAACATT CAACCCTCGA ACCTTCGACG AGCCTCGACG TCCCATCCTG CATCCCCCGC GTTTCGAGGT ACCCTCGCGT GAAAGACGTC ATCGCCCGCA AGTACCGCCT GGTGGTGAAG ACCATCGGCT ATATCGGCTG GTCGCTGTTC TGGCTGCTGA TCTGGGATGT GCTGGTCACC ATCGATTTCA TGCTGTTCTT GAACAGCAAG TTCACCCTGC CACTGATCCC GCTGACCCTG CTGGGCTCAG CGCTGGTGGT GCTGGTGAGT TTTCGCAACA GCAGCGCCTA CAGCCGCTGG TGGGAGGCTC GCACCCTGTG GGGCGCGCTG GTGAACAGTT CGCGCAGCTT CGCCCGGCAG ACGCTGACGC TGATCGATGA CCCGGATGAC GGCCTGAACC CGGTCAAGGC CACCCTGCTG CGCCGGCATA TCGCCTATGT GAACTGCCTG GCGGCGCACT TGAAAGGCGA AAGCTGCCCG GAGGAGCTGA TGGCCTTCAT CCCCCCGGCG GAGTTCGAAC GGCGCAACCG CTCGAACAAT TTCGCCAATG ACATTCTCGG CGGCTCGGCA GCCTTGCTGG CGCGGGAATA CCAGGCCGGG CGGCTGGACA GCATTCGTCT GGCGCGGCTG GAGTCGACGC TGGTAGACCT GTCTAACGCC CAGGGCGGCA TGGAGCGGAT TGCCAATACG CCATTGCCCT ACCCCTATGT GTATTTCCCA CGGCTGTTCA TCACCCTGTT CTGCCTGATC GTGCCGGTGG GGCTTGTGGA GTCGTTGGGC TGGTTCACGC CGCTGGCGTC GACGGTGGTA GGGTTCATGT TGCTGGCCAT CGAGCGGATC GGCACGGACT TGCAGAGCCC GTTCAGGTTC AGCGAGCATC AGATCCAGAT GGATACCATA TGCGAGACGA TCGAGCGCAA CCTGGAGTCG ATGCAGCGGG AGGCGCAGTG TGCCGAGGCT GTAGACGCCT GA
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Protein sequence | MQHSTLEPST SLDVPSCIPR VSRYPRVKDV IARKYRLVVK TIGYIGWSLF WLLIWDVLVT IDFMLFLNSK FTLPLIPLTL LGSALVVLVS FRNSSAYSRW WEARTLWGAL VNSSRSFARQ TLTLIDDPDD GLNPVKATLL RRHIAYVNCL AAHLKGESCP EELMAFIPPA EFERRNRSNN FANDILGGSA ALLAREYQAG RLDSIRLARL ESTLVDLSNA QGGMERIANT PLPYPYVYFP RLFITLFCLI VPVGLVESLG WFTPLASTVV GFMLLAIERI GTDLQSPFRF SEHQIQMDTI CETIERNLES MQREAQCAEA VDA
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