Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0743 |
Symbol | |
ID | 1044578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 861946 |
End bp | 862851 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144137 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | NP_742904 |
Protein GI | 26987479 |
COG category | [R] General function prediction only |
COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.25533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATAT TGCTGACAGG TGGCACCGGT TTGATTGGCA AGCATCTGTG CCAGTACTGG CTGGGCCAAG GGCATCGGCT TACGGTTTGG AGCAGGCGTC CTGAACAGGT GGCGAAAATC TGTGGTAGCG GGGTGCGTGG TATCGCGCGC CTGGAGCAGT TAGAGGCCGA CGATCATCTT GATGCGGTGG TCAACCTTGC CGGTGCGCCG ATTGCCGACA GGCCCTGGAC GGCCGCCCGG CGCAACGTGC TGTGGGCCAG CCGTGTCACC CTTACCGAGC AATTGCTGGC TTGGTTGGGC ACCCGTGAGC AGCGCCCGGA GGTGTTGATC TCCGGCTCTG CGGTAGGTTG GTACGGAGAC GGTGGCGAAC GCGAACTGAC CGAGGCCTCT CCCCCGGTGC GTGAAGATTT CGCCAGCCAG TTGTGTATTG CCTGGGAAGA GACCGCCCAG CGTTCGCAAG CGCAGGGAAT ACGCGTGGTA CTGGTCCGTA CCGGCCTGGT GCTGGCCAGC GATGGCGGCT TTTTGTCGCG CCTGCGCATG CCCTTCAAAC TGGGGCTGGG CGGGCCTTTG GGCAATGGGC GGCAATGGAT GCCCTGGGTT CATATAGACG ACCAGGTCGC CCTGATTGAT TTTCTCTTGC AGCACAAGGA TGCCAGCGGT CCTTATAATG CCTGCGCGCC GGAGCCTGTG CGCAACCGTG AGTTTGCCAG GCGACTGGGC CGCGCCCTGC ATCGGCCGGC GCTGTTGCCA GTGCCGGCAT TGCTGCTCAA GGCCGGGCTT GGCGAGATGT CCACCTTGCT GCTGGGAGGC CAGCGGGCGC GCCCGGTACG CTTGCTGGAA GCCGGCTTCA CCTTCCGCTT CAACGATCTG CAATCGGCGC TGGACAACCT GTCCAGTCGC CTCTGA
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Protein sequence | MHILLTGGTG LIGKHLCQYW LGQGHRLTVW SRRPEQVAKI CGSGVRGIAR LEQLEADDHL DAVVNLAGAP IADRPWTAAR RNVLWASRVT LTEQLLAWLG TREQRPEVLI SGSAVGWYGD GGERELTEAS PPVREDFASQ LCIAWEETAQ RSQAQGIRVV LVRTGLVLAS DGGFLSRLRM PFKLGLGGPL GNGRQWMPWV HIDDQVALID FLLQHKDASG PYNACAPEPV RNREFARRLG RALHRPALLP VPALLLKAGL GEMSTLLLGG QRARPVRLLE AGFTFRFNDL QSALDNLSSR L
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