Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0702 |
Symbol | |
ID | 1044533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 816050 |
End bp | 817207 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144095 |
Product | major facilitator family transporter |
Protein accession | NP_742863 |
Protein GI | 26987438 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.986291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGC GTTTGTTGGC GGGCTTATTG TTCGCTGTTT CTGTCGTGGG TTTCAGTTTG GGGGCCAGCT TGCCGCTGGT GTCGTTGCGC CTGCATGAAG CGGGGGCGAG CACACTGGAA ATCGGCATCA TCTCGGCCAT CCCTGCCGCC GGCATGATGC TCTCGGCTTT TCTGGTCGAC GCCTGCTGCC GCCATCTCAC CCGGCGCACC ATCTATCTGC TGTGTTTCAG CCTGTGCACG GTCAGCATCG CCTTGCTCGA GTCCGCGTTC GGCTCGTTGT GGCTGCTGGC GTTGCTGCGC CTGGGCCTGG GGCTTGGCAT GGGGATCGCC ATCATCCTCG GCGAGTCGTG GGTCAACGAA CTGTGCCCCG AACATAACCG CGGCAAGATC ATGGCCTTGT ACGCCACCAG CTTTACGGGC TTTCAGGTGC TGGGCCCGGC CATGCTGGCA GTGTTGGGCG CCGATAGCCC GTGGATCACG GGTGTCGTCA CGGTCTGTTA TGGGCTGGCG TTGCTGTGCA TTGTGCTGAC GGTGCCTAAC GACCATGTCG AGCACGAAGA GGGCGAAAAA AGCTTCGGCC TGGCCGGGTT CTTCCGTGTG GCACCGGCGT TGTGCATGGC GGTGCTGTTC TTCTCGTTCT TCGATGCCGT GGTGCTGTCG CTGCTGCCGG TGTACGCCAC CAGCCATGGC TTTGCCGTTG GCGTGGCGGC GTTGATGGTG ACGGTGGTGT TTGCCGGCGA CATGCTTTTC CAGCTGCCGC TGGGCTGGTT GGCCGATCGG GTTGAGCGCA CAGGGCTGCA CCTGGCGTGC GGGCTGGTGG CGATGGTGAT CGGCATCGGT TTGCCTTGGC TGCTGAATCT GACCTGGCTG CTGTGGCCGC TGCTGGTGGT GCTGGGCGCG GTGGCGGGGG GGATCTATAC CTTGGCGCTG GTGCTGATCG GGCAGCGCTT CAAGGGCCAG GACCTGGTCA CTGCCAACGC CAGTGTGGGC TTGCTGTGGG GCGTAGGCAG CCTGGTCGGG CCGCTGGTCA GTGGGGCGGC CATGAATGTC GCGCCGCATG GTTTGCCCAT GGCGCTGGCA CTGATGGCCG GGCTGTTCGT GTGCTTTGCC AGGCAGTCAT ACCGGCGCCG TGGGCGGATG CGGGCTGTGG CGCAGTGA
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Protein sequence | MNMRLLAGLL FAVSVVGFSL GASLPLVSLR LHEAGASTLE IGIISAIPAA GMMLSAFLVD ACCRHLTRRT IYLLCFSLCT VSIALLESAF GSLWLLALLR LGLGLGMGIA IILGESWVNE LCPEHNRGKI MALYATSFTG FQVLGPAMLA VLGADSPWIT GVVTVCYGLA LLCIVLTVPN DHVEHEEGEK SFGLAGFFRV APALCMAVLF FSFFDAVVLS LLPVYATSHG FAVGVAALMV TVVFAGDMLF QLPLGWLADR VERTGLHLAC GLVAMVIGIG LPWLLNLTWL LWPLLVVLGA VAGGIYTLAL VLIGQRFKGQ DLVTANASVG LLWGVGSLVG PLVSGAAMNV APHGLPMALA LMAGLFVCFA RQSYRRRGRM RAVAQ
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