Gene PP_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0701 
Symbol 
ID1044532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp814511 
End bp815725 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content62% 
IMG OID637144094 
ProductMFS efflux transporter, putative 
Protein accessionNP_742862 
Protein GI26987437 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA GTAGTGCCTC CACCGCATCC ACCCCGGCAG CGGCAAGCCA AGCCTCGCCG 
ATGGTGATGC GTATCATCGG TTTCTGCGCC TTGGCGCACT TGATCAACGA CCTGATCCAA
TCGGTGCTGC CCGCGATCTA CCCGATGCTC AAGGCCAACT ACGACCTGAG CTTCGCCCAG
ATCGGCATGA TCACGCTCAC GTTCCAGATC ACCGCCTCGC TGTTGCAGCC TTGGGTCGGC
TTCTTCACCG ACCGCCGGCC CACGCCAAAT CTGTTGCCGC TAGGCACCCT GTGTACGTTG
GTGGGGATCG TGATGCTGGC CTTCGTTGGC AGTTTCCCGA TGATCCTGCT GGCGTCGGCT
TTGGTGGGCA TTGGCTCGTC GACCTTCCAC CCGGAAACCT CGCGTATTGC ACGGCTGGCC
TCGGGCGGGC GCTTCGGCCT GGCCCAATCG ACCTTCCAGG TCGGTGGCAA CACCGGCTCT
GCTCTGGGCC CACTGCTGGC AGCGGCCATC GTCATACCGT TCGGCCAGAC CCATGTGGCC
TGGTTCGGCC TGGCAGGGCT GTTCTTCCTC GGCGTTACCC TGATGTTGCG CGGCTGGTAC
AAGGAACACC TCAATCAGGC CAAGGCGCGC AAGGCGGTGC AGGCCACTCA CGGCATTTCG
CGCAATCGGG TAATCGCGGC GCTGATCGTG CTGGGCTTGC TGGTGTTCTC CAAGTACTTC
TACATGGCCA GCTTCACCAG CTACTTTACC TTCTACCTGA TCGAGAAGTT CGGTGTGTCG
GTGGCCAGCT CGCAGCTGCA CCTGTTCCTG TTCCTCGGCG CGGTGGCGGC GGGCACCTTC
TTTGGCGGGC CGATCGGTGA CCGTATCGGG CGCAAGGCTG TGATCTGGTT TTCGATACTG
GGTGTGGCGC CGTTCACGCT GGCGCTGCCG TATGCCGACT TGTTCTGGAC CACGGTGCTG
AGCGTGGTGA TCGGCTTTAT CCTGGCTTCG GCGTTTTCCG CGATCGTGGT GTATGCGCAG
GAGCTGGTGC CGGGCAGCGT GGGCATGATT GCCGGGATCT TCTTTGGCCT GATGTTCGGT
TTTGGCGGCA TTGGCGCTGC GCTGTTGGGG TACGTAGCGG ACCTGCGTGG TATCGAATAC
GTGTATGGGT TGTGCTCGTT CCTGCCATTG TTCGGGTTGT TGGCGGTGTT GCTGCCAAGT
ACAGGTAAAC GCTGA
 
Protein sequence
MATSSASTAS TPAAASQASP MVMRIIGFCA LAHLINDLIQ SVLPAIYPML KANYDLSFAQ 
IGMITLTFQI TASLLQPWVG FFTDRRPTPN LLPLGTLCTL VGIVMLAFVG SFPMILLASA
LVGIGSSTFH PETSRIARLA SGGRFGLAQS TFQVGGNTGS ALGPLLAAAI VIPFGQTHVA
WFGLAGLFFL GVTLMLRGWY KEHLNQAKAR KAVQATHGIS RNRVIAALIV LGLLVFSKYF
YMASFTSYFT FYLIEKFGVS VASSQLHLFL FLGAVAAGTF FGGPIGDRIG RKAVIWFSIL
GVAPFTLALP YADLFWTTVL SVVIGFILAS AFSAIVVYAQ ELVPGSVGMI AGIFFGLMFG
FGGIGAALLG YVADLRGIEY VYGLCSFLPL FGLLAVLLPS TGKR