| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0633 |
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| Symbol | pilC |
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| ID | 1044452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 739416 |
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| End bp | 740624 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637144024 |
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| Product | type IV pili biogenesis protein PilC |
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| Protein accession | NP_742794 |
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| Protein GI | 26987369 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.360472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAT CTTCACTTCT CTACCACTGG CACGGCACCG ACGCCAACGG CGCGCCGGTC
AGCGGCCAAA CACCCGGGCG CAGCCCGGCT TATGTGCGCG CCGGGCTGAT TCGCCAGGGC
ATCACGGTGG CGAGTTTGCG GCCGGCCAGC GGGCTGGCGT TCAGCTTGCC AAAGCGGCGC
GAAAAGGCTG ACCCGGCGGG GTTCAGCCGG CAGTTGGCGA CGTTGCTCAA GGCCGGCGTG
CCGCTGCTGC AGGCGTTCGA GGTGATGGGC CGCAGTGGTT GCGATGCGGC GCAGGCGGCG
CTGCTGGAAA GATTGAAACA GGATGTGGCC TCGGGCCTGG GGTTGGCGGA TGCGTTGCAG
CGTCACCCGG CATGGTTCGA TGCGCTGTAT TGCAACCTGG TACGGGTGGG CGAGCAGTCC
GGTACGCTCG ACCGGCAACT GGAGCAACTG GCGGGCATGC TGGAACAGCG TCGGGTGCTG
CACAAGAAGG TGCGCAAGGC AATGATCTAC CCGCTGCTGC TGTTGCTGAC CGGGCTGGGG
GTGTCGGCGA TCTTGTTGCT GGAGGTGATT CCTAAATTCG AGAGCATGTT CTCGGGCATG
GGTGCGGCGT TGCCGGCATT TACCCAATGG GTGATCAACT TGTCCACAGG GCTGAGCCGG
TTTGCGCCGC TGCTGCTGGT GATGGGCGTG GTGATGGGTG TTGCCGTGCG CCAGCTTTAC
CGGCAGCACG CGCCAGCGCG CCTGTGGATA TCTCGACGGG TGCTGGGCTT GCCCGTGTTT
GGCAAGTTGC TGGGGCAGGC CGCGCTGGCG CGGTTTGCGC GCAGCCTGGC AACGTCCTAC
GGCGCCGGGG TGCCGTTGCT GGATGCGCTG GGGACGGTGG CGCGGGTAAC GGGTGGCGAC
CTGCACGAGC AGGCGGTGTT GCGGCTGCGC CAAGGCATGG CCAATGGGCA AGGGCTGAAC
CAGGCGATGG CCGGTGAACC GCTGTTCCCC CCCTTGCTGG TGCAGTTGAC GGCCATCGGT
GAATCCAGCG GCACGCTGGA CCAGATGCTG GAAAAAGCCG CCAGCCATTA CGAGGAACAG
GTCAGCCAGG CGCTGGATCA GTTGACCAGC CTGCTGGAGC CGGCCATCGT GCTGATCCTG
GGCTTGCTGG TGGGTGGCCT GGTGGTGGCG ATGTACCTGC CGATCTTCCA GTTGGGTAGT
TTGATCTGA
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| Protein sequence | MTSSSLLYHW HGTDANGAPV SGQTPGRSPA YVRAGLIRQG ITVASLRPAS GLAFSLPKRR
EKADPAGFSR QLATLLKAGV PLLQAFEVMG RSGCDAAQAA LLERLKQDVA SGLGLADALQ
RHPAWFDALY CNLVRVGEQS GTLDRQLEQL AGMLEQRRVL HKKVRKAMIY PLLLLLTGLG
VSAILLLEVI PKFESMFSGM GAALPAFTQW VINLSTGLSR FAPLLLVMGV VMGVAVRQLY
RQHAPARLWI SRRVLGLPVF GKLLGQAALA RFARSLATSY GAGVPLLDAL GTVARVTGGD
LHEQAVLRLR QGMANGQGLN QAMAGEPLFP PLLVQLTAIG ESSGTLDQML EKAASHYEEQ
VSQALDQLTS LLEPAIVLIL GLLVGGLVVA MYLPIFQLGS LI
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