Gene PP_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0624 
Symbol 
ID1044443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp729469 
End bp730209 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID637144010 
Producthypothetical protein 
Protein accessionNP_742785 
Protein GI26987360 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC TGACGCAGGC GTTGCTGTTC CCCGACTGGC CGGCCCCGGC TTCGGTCCGC 
GCCTGTGTCA CCACCCGTCA GGGCGGCGTC AGCCTGCCGC CTTACGAAAC CTTCAACCTC
GGCGACCATG TTGGGGATGA CCCTGCCGCG GTCGCCGAGA ACCGCCGCCG CCTGAGCGAA
CAGTTCACCA TCCAACCGGC CTGGCTCAAG CAGGTGCATG GGCGGGTGGT GGCGGATGCC
GACCCGACCG TGGTGGCCGA GGCCGATGCC AGCTGGACCC GCCAGCCTGG CATTGCCTGC
ACCGTGATGA CCGCCGATTG CCTGCCTGCG CTGTTCTGCG ACCGCGCGGG CACCCGCGTG
GCGGCGGCGC ATGCTGGCTG GCGTGGGCTG GCGGGTGGCG TGCTGGAAGC CACGCTGGAC
CGGCTGGCGC TGCCGCCAGA AGAGGTGCTG GTGTGGTTGG GGCCTGCCAT CGGCCCGCAA
GCATTCGAAG TGGGGCTGGA AGTGCGTGAT GCCTTTACCG CCGTGCACCC GCAAGCAGCT
CGGGCATTCG TCGACGGCGA ACGGCCAGGC AAGCTGTTGG CGGATATCTA TGAGCTGGCG
CGTATTCGCC TGGCTGCCCG TGGCGTGACT GCTGTTTATG GCGGTGGCTT GTGCACGGTC
AGTGATGCGC GGTTCTTCTC CTATCGCCGT ACCCCGCAGG GTGGGCGTTT TGCATCGTTG
GTCTGGCTGG ACCCGCGCTA G
 
Protein sequence
MSDLTQALLF PDWPAPASVR ACVTTRQGGV SLPPYETFNL GDHVGDDPAA VAENRRRLSE 
QFTIQPAWLK QVHGRVVADA DPTVVAEADA SWTRQPGIAC TVMTADCLPA LFCDRAGTRV
AAAHAGWRGL AGGVLEATLD RLALPPEEVL VWLGPAIGPQ AFEVGLEVRD AFTAVHPQAA
RAFVDGERPG KLLADIYELA RIRLAARGVT AVYGGGLCTV SDARFFSYRR TPQGGRFASL
VWLDPR