| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0617 |
|---|
| Symbol | |
|---|
| ID | 1044434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 722747 |
|---|
| End bp | 723766 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637144004 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | NP_742779 |
|---|
| Protein GI | 26987354 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA AAAACCCATT GCCAGTCGCC AAGGGCCGCG CCCCGGCGCT GCTGTCGCTG
GTAGTTGCCA GCCTGGTGGC GCTGCCGCTG TTGCTGCCCT CGGCCACCCT GGCCACCGAG
ATCCTGATCT TTGCCATGGC CGCACTGGCC TGCAACCTGC TGCTCGGCTA CACCGGACTG
CTGTCGTTCG GCCAGGGCAT CTTCTTTGGC GTGGGCGCCT ATGGCGCAGC GCTGCTGATG
ATCCACCTGC AGTGGGGCAT GTTCGCCGCG CTGCTTGGCG CAGCAGTGTT CGGCGCCTTC
CTCGCGCTGC TGGTGGGCGC ACTGGCGATC CGTCGCACGG GCATCTACTT CGTCATGCTG
ACCCTGGCCT TCAGCCAGAT GGCCTACTTC CTGGCCTATA CCCTCAGCGG CTGGACCGGC
GGTGACAACG GCCTGCTTGA TGTGCCACGG CCGAATATCG AAATCGCCGG CCATGTGCTA
GTCGACCTGG CCGACCCACG GCACTTCTAT GTGTTCGTCG CGGTGCTGTT CCTGTTGATC
TTCGCCGCAG CCCTGCGGGT GATCCGTTCG CCATTCGGCA GCACCCTGCT GGCTATCCGT
GAGAACGAGA CCCGCGCCGC CGCCATCGGC TACGACACCC GCCATTTCAA GATTCTGGTG
TTCATGCTGT CGGGCGCCAT CACCGGCATC GCCGGGGCGC TGTACGCCAT GCTGCTGCAC
TTTGCGCCGC TGTCGAACAT CGACCTGATG ATGAGCGAGA ACATCCTGAT CATGACCATC
GTCGGCGGCA CCGGCTCATT GTTCGGCTCG CTGCTGGGGG CCGGCGCCAT CGTGCTGCTG
GGTGACGTGC TGTCGGAGCT TTGGCCACGC TGGCTGATGC TGCTGGGGGT GATCCTGATT
CTGGTGGTGG TGTTCATGCG TGGCGGCCTG TGGGGCGGCC TGACCGAACT GGGCAAGCGC
CTGCTGGCCA CGCGCAATGC CGATGACAAA CCCCAGGCCA AGACCAAGGA GACCCTGTAA
|
|---|
| Protein sequence | MSEKNPLPVA KGRAPALLSL VVASLVALPL LLPSATLATE ILIFAMAALA CNLLLGYTGL
LSFGQGIFFG VGAYGAALLM IHLQWGMFAA LLGAAVFGAF LALLVGALAI RRTGIYFVML
TLAFSQMAYF LAYTLSGWTG GDNGLLDVPR PNIEIAGHVL VDLADPRHFY VFVAVLFLLI
FAAALRVIRS PFGSTLLAIR ENETRAAAIG YDTRHFKILV FMLSGAITGI AGALYAMLLH
FAPLSNIDLM MSENILIMTI VGGTGSLFGS LLGAGAIVLL GDVLSELWPR WLMLLGVILI
LVVVFMRGGL WGGLTELGKR LLATRNADDK PQAKTKETL
|
|---|
| |