Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0597 |
Symbol | mmsA-1 |
ID | 1044408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 695578 |
End bp | 697071 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637143980 |
Product | methylmalonate-semialdehyde dehydrogenase |
Protein accession | NP_742760 |
Protein GI | 26987335 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0807275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTG TTCAGCACCT GATTCACGGC GAACTGGTTA CCAAGGGTGA GCGCACCGCC GATGTCTTCA ACCCGTCCAC TGGCCAGGCC GTTCGCAAGG TCGAACTGGC CAGCCGCGCA ACCGTGCAGG AAGCGATCGA CTCGGCCAAG GCAGCCTTCC CGGCCTGGCG CAACACCCCT CCGGCCAAGC GCGCCCAGGT GATGTTCCGC TTCAAGCAAC TGCTGGAGCA GAACGAAGCC AAGATTTCGC AGATGATCAG CGAAGAGCAC GGCAAGACCC TGGAAGATGC CGCCGGTGAA CTGAAGCGTG GTATCGAGAA CGTCGAGTTC GCGTGTGCAG CCCCAGAAGT GCTGAAGGGC GAGTACAGCC GCAACGTCGG TCCGAACATC GACGCCTGGT CCGACTTCCA GCCGCTGGGC GTGGTTGCCG GTATCACCCC ATTCAACTTC CCGGCCATGG TGCCGCTGTG GATGTACCCG CTGGCCATCG CCTGTGGCAA CGCATTCATC CTCAAGCCTT CCGAGCGTGA CCCGAGCTCG ACCCTGTACA TTGCCCAGTT GCTGCTGGAA GCTGGCCTGC CGAAGGGCAT CCTCAACGTC GTGCACGGTG ACAAGGAAGC GGTGGATGCG CTGATCGAAG CGCCGGAAGT CAAAGCACTG AGCTTCGTGG GCTCGACCCC GATCGCCGAG TACATCTATG CCGAAGGCAC CAAGCGTGGC AAGCGTGTAC AAGCCCTGGG TGGCGCGAAG AACCATGCGG TGCTGATGCC GGATGCCGAC CTGGACAACG CCGTCAGTGC ACTGATGGGC GCGGCTTACG GTTCGTGTGG CGAGCGTTGC ATGGCCATTT CGGTAGCCGT GTGCGTGGGC GACCAAGTGG CCGATGCCCT GATTGCCAAG CTGGAGCCAC AGATCAAGGC GCTGAAGATT GGTGCCGGCA CCTCGTGCGG CCTGGACATG GGCCCGCTGG TGACTGCGGC AGCGCGTGAC AAGGTCGTGG GTTACATCGA TGACGGTGTT GCTGCTGGCG CCAAGCTGGT GGTGGATGGC CGTGGCTTCC GTGTGGCGGG TAATGAAGAT GGCTACTTTG TGGGTGGCAC CCTGTTCGAC AAGGTGACCC CGGAGATGCG CATCTATAAA GAGGAGATCT TTGGCCCGGT GCTGTGCGTG GTCCGTGTGA ATAGCCTGGA GCAGGCCATG CAGCTGATCA ACGATCACGA GTATGGCAAC GGCACCTGTA TCTTTACCCG TGACGGTGAA GCGGCCCGTC TGTTCTGCGA CGAGATCGAG GTGGGTATGG TGGGTGTGAA CGTACCGCTG CCGGTGCCGG TGGCCTACCA CAGCTTCGGT GGCTGGAAGC GTTCGCTGTT TGGTGACCTG CATGCCTATG GCCCGGATGG TGTGCGCTTC TATACCCGTC GCAAGGCCAT TACCCAGCGT TGGCCGCAGC GGGCCAGCCA TGAAGCGTCG CAGTTTGCAT TCCCTAGCCT GTAA
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Protein sequence | MSIVQHLIHG ELVTKGERTA DVFNPSTGQA VRKVELASRA TVQEAIDSAK AAFPAWRNTP PAKRAQVMFR FKQLLEQNEA KISQMISEEH GKTLEDAAGE LKRGIENVEF ACAAPEVLKG EYSRNVGPNI DAWSDFQPLG VVAGITPFNF PAMVPLWMYP LAIACGNAFI LKPSERDPSS TLYIAQLLLE AGLPKGILNV VHGDKEAVDA LIEAPEVKAL SFVGSTPIAE YIYAEGTKRG KRVQALGGAK NHAVLMPDAD LDNAVSALMG AAYGSCGERC MAISVAVCVG DQVADALIAK LEPQIKALKI GAGTSCGLDM GPLVTAAARD KVVGYIDDGV AAGAKLVVDG RGFRVAGNED GYFVGGTLFD KVTPEMRIYK EEIFGPVLCV VRVNSLEQAM QLINDHEYGN GTCIFTRDGE AARLFCDEIE VGMVGVNVPL PVPVAYHSFG GWKRSLFGDL HAYGPDGVRF YTRRKAITQR WPQRASHEAS QFAFPSL
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