Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0595 |
Symbol | |
ID | 1044406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 693122 |
End bp | 694039 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143978 |
Product | LysR family transcriptional regulator |
Protein accession | NP_742758 |
Protein GI | 26987333 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.872616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAC GCCCCGATCC ACTCGCCCAA GTCAGCGATT TCGACATCCG CCTGCTGAAG ATCTATCGCA GCGTCGTCGA GTGCGGTGGC TTCTCGGCTG CCGAAAACGT ACTGGGCATT GGTCGCTCGG CCATCAGCCA GCAGATGAAC GACCTCGAGC AACGCCTCGG CCTGCGCCTG TGTCAGCGCG GCCGCGCCGG TTTCTCGCTG ACGGAGGAAG GCCGCGAGGT CTACCATTCA GCCCTGCAAC TGCTCAGCGC GCTGGAAACC TTCCGCACCG AGGTCAACGG CCTGCACCAG CATTTGCGCG GCGAGCTGAA CATCGGCCTG ACCGACAACC TGGTGACCCT GCCGCACATG CGTATCACCC ATGCCCTGGC GGAACTCAAG GATCGGGGCC CTGATGTGCG CATCCAGATC CGCATGATCG CCCCCAGCCA GGTCGAGCAC GGCGTGCTCG ACGGCAGCCT GCACGTTGGC GTCGTACCAC AGACCAGCCC GTTATCGGGG CTTGAGTATC AACCGTTGTA CAGCGAACGC TCGCTGCTGT ACTGCGCGGT TGGCCACCCG CTGTTCTACG CCGACGACCA GCAGATAGAC GACGAGCGCC TCAACAGCCA GGAAGCCATC ACCCCCACCT TCCGCCTGCC GGCCGACATC CAGGCGCACT ACCAGGCGCT GAATTGCACA GCCAGTGCTT CTGACCGCGA GGGCATGGCG TTTCTCATCC TTACCGGGCG CTATATCGGC TACCTGCCCG ACCACTACGC CATGTTCTGG GTGCAGCAAG GCCGTTTGCG TGCGCTCAAA CCCAAGGAGC GTTTTTATGA CCTGAGCCTG AGCTGGGTTA CCCGCAAAGG CCGGCGCCCC AACCTGGTGT TGGAAAGCTT CCTCGAAAGC CTGGCTGCGA CACGTTGA
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Protein sequence | MSRRPDPLAQ VSDFDIRLLK IYRSVVECGG FSAAENVLGI GRSAISQQMN DLEQRLGLRL CQRGRAGFSL TEEGREVYHS ALQLLSALET FRTEVNGLHQ HLRGELNIGL TDNLVTLPHM RITHALAELK DRGPDVRIQI RMIAPSQVEH GVLDGSLHVG VVPQTSPLSG LEYQPLYSER SLLYCAVGHP LFYADDQQID DERLNSQEAI TPTFRLPADI QAHYQALNCT ASASDREGMA FLILTGRYIG YLPDHYAMFW VQQGRLRALK PKERFYDLSL SWVTRKGRRP NLVLESFLES LAATR
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