Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0528 |
Symbol | ispA |
ID | 1044304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 614357 |
End bp | 615244 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637143911 |
Product | polyprenyl synthetase |
Protein accession | NP_742691 |
Protein GI | 26987266 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGGCA CCTACCAGGC CAGTTGCCAG GCGCGCGTCG ACGCAGCCCT CGAACCGCTG TTCATCGCCC CGAGCAAAGA GCTGGAACGC CTTTACGCCG CCATGCGCTA CAGCGTGATG AACGGCGGCA AACGCGTGCG CCCGTTGCTG GCCTACGCGG CCTGCGAAGC CTTGGGCGCC CCGGCCGAAC AGGCCAACGG TGCAGCCTGC GCGGTCGAGC TGATCCATGC TTACTCGCTG GTGCATGACG ACCTCCCGGC CATGGACGAC GACGACCTGC GTCGCGGCCA GCCGACCACC CACAAGGCGT TTGACGAAGC GTGCGCCATC CTTGCTGGCG ACGGTTTGCA GAGCCTGGCT TTCAGTGCCC TGCTCGACCC TTGCCTGAGC CCTCAGATCG ACAGCATTCG CCTGGCCATG GTTCAGGTGC TGGCCAAAGC TGCCGGCCCG GCCGGCATGG TTGGCGGCCA GGCCATCGAT CTCGGTTCGG TGGGCCAGAA GCTGGACCAG CAGGCGCTGG AGTTCATGCA CCGGCACAAG ACCGGCGCGC TGATCGAAGC CAGCGTACGC CTCGGCGCCC TGGCAAGTGC CCGTGCCGAA CCGGTGCAGC TGGATGCCCT GCAAACTTAT GCACAGGCCA TTGGCCTGGC ATTCCAGGTG CAGGACGACA TCCTCGACGT GGAAAGCGAC ACTGCTACCT TGGGCAAACG CCAAGGTGCA GACATAGCGC GTGACAAACC GACCTACCCG GCCCTGCTGG GCCTGGAAGC CGCCAAAGCC TATGCAATCG AACTGCGCGA CCAGGCGCTG GCCGCACTGC AAGGGTTCGG CGAAAAGGCC GAGCCGCTGC GGGCCTTGGC GCGTTATATT GTCGAACGCC GTAACTAA
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Protein sequence | MIGTYQASCQ ARVDAALEPL FIAPSKELER LYAAMRYSVM NGGKRVRPLL AYAACEALGA PAEQANGAAC AVELIHAYSL VHDDLPAMDD DDLRRGQPTT HKAFDEACAI LAGDGLQSLA FSALLDPCLS PQIDSIRLAM VQVLAKAAGP AGMVGGQAID LGSVGQKLDQ QALEFMHRHK TGALIEASVR LGALASARAE PVQLDALQTY AQAIGLAFQV QDDILDVESD TATLGKRQGA DIARDKPTYP ALLGLEAAKA YAIELRDQAL AALQGFGEKA EPLRALARYI VERRN
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