| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0517 |
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| Symbol | ribH |
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| ID | 1044292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 603694 |
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| End bp | 604170 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637143900 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | NP_742680 |
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| Protein GI | 26987255 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.238548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCTGA AGACCATCGA AGGTACCTTC ATCGCCCCCA AAGGTCGCTA TGCTTTGGTG
GTTGGCCGCT TCAACAGCTT CGTTGTCGAA AGCCTGGTAA GCGGTGCCGT TGATGCCCTG
GTACGCCACG GTGTCAGCGA AAGCGACATC ACCATCATCC GTGCCCCGGG TGCATTCGAG
ATCCCGCTGG TGGCACAGAA GGTCGCCCAG CAAGGCGCCT ACGACGCGAT CATCGCCCTG
GGCGCCGTGA TCCGTGGCGG TACCCCGCAC TTCGAATACG TGGCGGGCGA GTGCACCAAG
GGCCTGGCCC AGGTGTCCAT GGAGTTCGGT GTTCCGGTGG CCTTCGGCGT ACTGACCGTC
GACTCCATCG AGCAAGCCAT CGAGCGTTCT GGCACCAAAG CCGGTAACAA AGGTGCTGAA
GCTGCCCTGT CCGCACTGGA AATGGTCAGC CTGCTGGCGC AGTTGGAGGC CAAGTGA
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| Protein sequence | MTLKTIEGTF IAPKGRYALV VGRFNSFVVE SLVSGAVDAL VRHGVSESDI TIIRAPGAFE
IPLVAQKVAQ QGAYDAIIAL GAVIRGGTPH FEYVAGECTK GLAQVSMEFG VPVAFGVLTV
DSIEQAIERS GTKAGNKGAE AALSALEMVS LLAQLEAK
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