Gene PP_0485 details

Gene Information

• Locus tag: PP_0485
• Symbol: ssb
• ID: 1044255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 571027
• End bp: 571572
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637143871
• Product: single-stranded DNA-binding protein
• Protein accession: NP_742651
• Protein GI: 26987226
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 7
• Fosmid unclonability p-value: 0.0174674
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCCGTG GGGTTAACAA AGTCATTCTG GTCGGTACCT GTGGCCAGGA TCCCGAAGTC 
CGCTACCTGC CCAACGGTAA CGCCGTGACC AACCTGAGCC TGGCCACCAG CGAGCAGTGG 
ACTGACAAGC AGTCGGGCCA GAAGGTCGAG CGTACCGAGT GGCACCGTGT GTCGCTGTTC 
GGCAAGGTTG CCGAAATCGC TGGCGAATAC CTGCGCAAGG GTTCGCAGTG CTACATCGAA 
GGCAAGCTGC AGACCCGCGA GTGGGAAAAA GACGGCATCA AGCGCTACAC CACCGAGATC 
ATCGTCGATA TCAACGGCAC CATGCAGCTG CTCGGCGGTC GTCCGCAGGG CCAGCAGCAG 
GGCGGCGACC CGTACAACCA AGGTGGCGGC AATTATGGTG GTGGCCAGCA GCAACAGTAC 
AACCAGGCAC CGCCACGCCA GCAGGCCCAG CGCCCGCAAC AGGCCCCTCA GCGCCCAGCG 
CCGCAACAGC CTGCGCCGCA GCCGGCGGCT GACTTCGACA GCTTCGATGA CGATATTCCG 
TTCTGA 

 

Protein sequence

MARGVNKVIL VGTCGQDPEV RYLPNGNAVT NLSLATSEQW TDKQSGQKVE RTEWHRVSLF 
GKVAEIAGEY LRKGSQCYIE GKLQTREWEK DGIKRYTTEI IVDINGTMQL LGGRPQGQQQ 
GGDPYNQGGG NYGGGQQQQY NQAPPRQQAQ RPQQAPQRPA PQQPAPQPAA DFDSFDDDIP 
F