Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0436 |
Symbol | tyrS |
ID | 1044169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 522932 |
End bp | 524131 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637143815 |
Product | tyrosyl-tRNA synthetase |
Protein accession | NP_742602 |
Protein GI | 26987177 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00177319 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0465602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCGG TTGAAGAGCA GCTGGCGCTT ATCAAGCGCG GTGCGGAAGA AGTACTGGTC GAGTCGGAAC TGGTGGAGAA GCTCAAGCGC GGCCAACCTC TGCGCATCAA GGCTGGCTTT GACCCGACCG CACCTGACCT GCACCTGGGT CACACGGTGC TGATCAACAA GCTGCGCCAG TTCCAGGATC TGGGCCACCA GGTCATCTTC CTGATTGGTG ACTTCACCGG CATGATTGGC GACCCGAGCG GCAAGAGCGC CACGCGCCCG CCGCTGACCC GCGAGCAGGT GCTGGAGAAC GCCGAGACGT ACAAGCAGCA GGTTTTCAAG ATTCTTGACC CTGCCAAGAC TGAAGTCGCG TTCAACTCCA CGTGGATGGA CAAGCTGACC CCTGCCGACT TCATTCGCCT GGCTTCGCAG TACACCGTCG CGCGCATGCT GGAGCGTGAT GACTTCGACA AGCGTTACAC CACCAACCAG CCGATTGCCA TTCACGAGTT CCTCTATCCG CTGGTGCAGG GGTACGACTC GGTAGCGCTG AAGGCGGACG TTGAGCTGGG CGGTACCGAC CAGAAGTTCA ACCTGCTGAT GGGGCGCGAA CTGCAGCGCT CTTATGGCCA GGAAGCGCAG AACATTGTGA CCATGCCACT GCTCGAAGGG CTCGACGGCG TGAAGAAGAT GTCGAAGTCG CTGGGCAACT ATGTCGGCAT CCAGGAAGCG CCAGGGGTGA TGTACAGCAA GCTGGTGTCG ATCCCGGATA CCCTGATGTG GCGTTACTTC GAGCTGCTGA GCTTCCGTTC GATGGAAGAA ATCGAGCAGT TCCGTGCCGA CGTCGCCAAC GGTGCCAACC CGCGTGACAT CAAGATCAAG TTGGCAGAAG AGATCGTCGC GCGCTTCCAT GGAGAAGAGG CTGCGGCCAA TGCTCACCGT GCTGCCGGTA ACCGTATGAA GGAAGGCGAG CTGCCGGAAG ACTTGCCGGA GATCGAAGTG GCTGCGGCGG AAGACCTGCC AATTGCTGCG GTGCTGAACC GGGCTGGTCT GGTCAAGAAC TCGGCACAGG CGCGAGACTT GCTGAATAGC GGCGCGGTGA AAGTTGATGG TGCAGTGGTC GACAAGGACT TCATGTTTGT CCTTGGTGCT ACCCATGTGT GCCAAGCGGG CAAGAAGTCG TTTGGCCGGG TTACCCTCAA GGCTGAGTGA
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Protein sequence | MKSVEEQLAL IKRGAEEVLV ESELVEKLKR GQPLRIKAGF DPTAPDLHLG HTVLINKLRQ FQDLGHQVIF LIGDFTGMIG DPSGKSATRP PLTREQVLEN AETYKQQVFK ILDPAKTEVA FNSTWMDKLT PADFIRLASQ YTVARMLERD DFDKRYTTNQ PIAIHEFLYP LVQGYDSVAL KADVELGGTD QKFNLLMGRE LQRSYGQEAQ NIVTMPLLEG LDGVKKMSKS LGNYVGIQEA PGVMYSKLVS IPDTLMWRYF ELLSFRSMEE IEQFRADVAN GANPRDIKIK LAEEIVARFH GEEAAANAHR AAGNRMKEGE LPEDLPEIEV AAAEDLPIAA VLNRAGLVKN SAQARDLLNS GAVKVDGAVV DKDFMFVLGA THVCQAGKKS FGRVTLKAE
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