Gene PP_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0407 
SymboldjlA 
ID1044124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp494238 
End bp495005 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID637143786 
Productheat shock protein DnaJ domain protein 
Protein accessionNP_742573 
Protein GI26987148 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTGGC CAGGCACGGT GATAGGCGTG GGTGCCGGCT TTGCCGTTGC GAGCATACCG 
GGTGCCTTGC TCGGTGCGTT GCTTGGGCAG GCCATCGACC GCCGGCTGCG CTTGCAAGGC
TGGGAAGACA TGCGCGAACG CCTGGGTGGG CGCCCTGCAT TACGCGACGA CGAGTTGTTG
TTCGTGATGC TCGGGCGCCT GGCCAAGTGC GATGGCCGGG TAGCCGAGCA GCATATCCAG
CAGGCGCGTC AGGAGATGGT GCGCCTGGAC CTGGCCGAGG CAGCCCGGTT GCGCGCCATC
AATGCGTTCA ACCGTGGCAA GGCGGGCAAG GACCGGCTTG GCGGGCACCT GCGGCGCATC
AGTCAGCAGC CCCACGCGGC GGAAGGTACC TTGCGGGCCT GTTGGCGCAT GGTCTGGGCT
GACGGCAAGA TGGGCAACAA GGAGCGTGAG TTGCTGCTGG ACTGGGGGCA GAAGCTGGGC
ATGAGCCGGC GCCAGGTGCA GGCCATGTCC CTGGAGTACG AGCCGCGCAA GGCCACGGGA
GCAGAAAGCG TGCCCATGAC CTACGCGGCA GCGTTGCGCT TGCTGGCGGT GGACGCAGAC
ACCGACACCG ATAAGGTCAA GCAGGCGTAT CGTCGGCTTG TCAGCCGGCA TCACCCGGAC
AAGCTGGCAG GTACCGGTGC CAGCGAGGCG CAGGTGCGTG AAGCAACCGC GCGTACCCGT
GAGTTGCACC AGGCCTATGC CATGATCCGC AAGCGGCGCG GCCTTTGA
 
Protein sequence
MWWPGTVIGV GAGFAVASIP GALLGALLGQ AIDRRLRLQG WEDMRERLGG RPALRDDELL 
FVMLGRLAKC DGRVAEQHIQ QARQEMVRLD LAEAARLRAI NAFNRGKAGK DRLGGHLRRI
SQQPHAAEGT LRACWRMVWA DGKMGNKERE LLLDWGQKLG MSRRQVQAMS LEYEPRKATG
AESVPMTYAA ALRLLAVDAD TDTDKVKQAY RRLVSRHHPD KLAGTGASEA QVREATARTR
ELHQAYAMIR KRRGL