| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0403 |
|---|
| Symbol | surA |
|---|
| ID | 1044118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 488297 |
|---|
| End bp | 489616 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637143783 |
|---|
| Product | survival protein SurA |
|---|
| Protein accession | NP_742570 |
|---|
| Protein GI | 26987145 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.369388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGACCA AGCTTATTGA TCGTCTGCGC CCAGTGTTGC TGGGCGTCGC TTTGCTGAGT
GGCGCGGTGC ATGCCGCGGT GCAACCTCTT GATCGCGTGG TGGCTATCGT CGACAACGAC
GTGGTCATGC AAAGCCAGCT GGACCAGCGT GTCCATGAGG TCCAGCAAAC CATCGCCAAG
CGCGGCGGCG GCGTGCCGCC GACCAGCGCC CTGGAACAGC AGGTCCTGGA ACGCCTGATC
GTCGAGAACC TGCAGCTGCA GATCGGCGAG CGCTCTGGTA TCCGCATCAC CGACGAAGAG
CTGAACCAGG CCATTGGCAC CATTGCCCAG CGCAATGGCA TGTCGCTGGA CCAGTTCCGC
GCGGCGCTGG CCCGTGACGG CCTGTCGTTC GACGACGCTC GCGAGCAGGT CAAGCGCGAG
ATGATCATCA GCCGCGTGCG CCAACGCCGC GTTGCCGAGC GCATTCAGGT GTCCGAGCAG
GAAGTGAAGA ACTTCCTGGC CTCGGACCTG GGCAAGATGC AGATGTCGGA AGAGTACCGC
CTGGCCAACA TCCTCATCCC GACCCCGGAA GCCGCCAACT CGGACGATAT CCAGAAGGCT
GCGCGCAAGG TCGGTGACGT GTACCAGCAA CTGCGCCAGG GTGCCGACTT CGGCCAGATG
GCGATTGCCA ACTCGGCCAG CGAAAACGCC CTGGAAGGCG GCGAGATGGG CTGGCGTAAA
GCCGGTCAGC TGCCACCCGA CTTCGCCAAG ATGCTCAGCA GCATGCCAGT GGGCGAAATT
ACCCAGCCTA TTCGCATCCC CAACGGCTTC ATCATCCTCA AGCTCGAGGA GAAGCGCGGC
GGCAGCGAGA ACGTGCTGCG CGACGAAGTG CATGTACGCC ACATCCTGAT CAAGCCAAGC
GAGATCCGCA GCGAGGCGGC CACCGAGCAG CTGGCCGAGC GCCTTTATGA TCGGATCAAG
AACGGCGAAG ACTTCGGCGA ACTGGCCAAG AGCTTCTCGG AAGACCCGGG TTCGGCACTC
AACGGCGGCG ACCTCAACTG GGTCGATCCG AACAGCCTGG TACCGGAGTT CCGTGAACAG
ATGGCCAATG CCCAGCAAGG CGTAGTGACC AAACCGTTCA AGACCCAGTA CGGCTGGCAC
GTTCTGGAAG TGCTGGGCCG CCGCGCCACC GACAGCACCG AGCAAGCTCG CGAACAGCAG
GCCCTGAGCG TACTGCGCAA CCGCAAGTAT GACGAAGAGC TGCAAACCTG GCTGCGCCAG
ATCCGCGACG AAGCCTACGT TGAAATCAAG CTGCCTGGCG CTGACCAGGC CGCCCAGTGA
|
|---|
| Protein sequence | MKTKLIDRLR PVLLGVALLS GAVHAAVQPL DRVVAIVDND VVMQSQLDQR VHEVQQTIAK
RGGGVPPTSA LEQQVLERLI VENLQLQIGE RSGIRITDEE LNQAIGTIAQ RNGMSLDQFR
AALARDGLSF DDAREQVKRE MIISRVRQRR VAERIQVSEQ EVKNFLASDL GKMQMSEEYR
LANILIPTPE AANSDDIQKA ARKVGDVYQQ LRQGADFGQM AIANSASENA LEGGEMGWRK
AGQLPPDFAK MLSSMPVGEI TQPIRIPNGF IILKLEEKRG GSENVLRDEV HVRHILIKPS
EIRSEAATEQ LAERLYDRIK NGEDFGELAK SFSEDPGSAL NGGDLNWVDP NSLVPEFREQ
MANAQQGVVT KPFKTQYGWH VLEVLGRRAT DSTEQAREQQ ALSVLRNRKY DEELQTWLRQ
IRDEAYVEIK LPGADQAAQ
|
|---|
| |