Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0394 |
Symbol | cca |
ID | 1044107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 478361 |
End bp | 479467 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143774 |
Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
Protein accession | NP_742561 |
Protein GI | 26987136 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.936074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCT ACAAAGTTGG CGGCGCCGTG CGCGACCGTT TGCTCGGCCG CCCTGTCAGC GATATCGACT GGCTGGTGGT GGGCGCCACC GTCGAAGAAA TGCTAGCAAA TGGCTATCGG CCGGTGGGAG CCGATTTCCC GGTGTTCCTG CACCCGAAAA CCGGTGAGGA ATACGCCCTG GCGCGCACCG AGCGCAAGAG TGGGCGAGGC TACGGCGGGT TCACTTTTCA CGCCAGCCCC GACGTAACCC TGGAAGAAGA CCTGATCCGC CGCGACCTCA CCATCAATGC GATGGCCGAG GATGAGGCGG GCACAGTCTA CGACCCCTAC CAAGGCAAGA ACGATCTGGA TCAACGCCTG CTACGCCATG TTTCCCCGGC ATTCGCCGAA GATCCTTTGC GGGTGCTGCG CGTTGCACGC TTTGCTGCCC GTTACGCACC ACTGGGGTTC CGGGTTGCCG ATGAAACCTT GGCGCTGATG CGCCAGATCA GCGCCTCAGG CGAACTGCAG GCACTCACTG CCGAGCGCAG CTGGAAGGAA ATCGAGCGCG CGCTGATGGA AGTGCAACCG CAGGTATTCT TCAAGGTGCT GAGCGCGTGT GGGGCCCTGC AGGAGCTGCT GCCTGAGCTC GATGACGGCT CCCGGACATT GGCGGCGCTG GAGCAGGCGG CGGCGCACGA ACAACCGCTG AACGTGCGCT GGGCCTGCCT GTTGCGGGGG TTGCCACCGA CATCGATCAA AGCCGTCAAC CAGCGCCTGA AGGCACCGCG AGAGTGCCAG GAACTGGCCA TGCTGACCGG GGAATGCCTG GCGCAGGGTA ATCAGGCGCT CGAACTGCCT GCCACGGCAC TGCTGGAGCT GTTGCAGAAA TTCGATGTTT ACCGACGGCC GCAGCGATTT GAGGATTTTT TGACCGTTTG CGAGATGGCG GCGCGGGGCG ATGGCGAGCA GGGTTACCCA CAGGCCGATT ACCTGCGAGG CGCAGCAGCG GCGGCGCGAG CGGTGGATGT GAAGCCGTTG GTGCAAGCCG GGCTGACCGG TCAGGCACTG GGCGAAGCAC TCAAAGGTGA ACGGCTGAAA GCGCTCGAGG CTTACCAGCG CGGTTAG
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Protein sequence | MHIYKVGGAV RDRLLGRPVS DIDWLVVGAT VEEMLANGYR PVGADFPVFL HPKTGEEYAL ARTERKSGRG YGGFTFHASP DVTLEEDLIR RDLTINAMAE DEAGTVYDPY QGKNDLDQRL LRHVSPAFAE DPLRVLRVAR FAARYAPLGF RVADETLALM RQISASGELQ ALTAERSWKE IERALMEVQP QVFFKVLSAC GALQELLPEL DDGSRTLAAL EQAAAHEQPL NVRWACLLRG LPPTSIKAVN QRLKAPRECQ ELAMLTGECL AQGNQALELP ATALLELLQK FDVYRRPQRF EDFLTVCEMA ARGDGEQGYP QADYLRGAAA AARAVDVKPL VQAGLTGQAL GEALKGERLK ALEAYQRG
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