Gene PP_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0393 
SymbolfolK-1 
ID1044106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp477742 
End bp478251 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID637143773 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionNP_742560 
Protein GI26987135 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.502269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTGA GCACGGTTTA CCTGGGCCTG GGCAGCAACA TCGACCGTGA GGCGCATTTG 
TGCGCCGGGC TCGATGCGTT GGCTGGCATC CTGACTGACA TGCGCTGTTC GCCGGCCTTC
GAAAGCCAGG CGGTGGGCAT CAAGAGCGGG CCGTTCATCA ACTTCGTGGT GACGGGGCAA
ACCGCGTTGC CGTTGATCGA GCTGGACCGC CGGCTGAAGT TCATCGAGGC CGACAATGGC
CGCTATGCAC CGGACCGCAA AGGGTTGCCG CTGGATATCG ACGTGCTGAT GTATGACGAT
TTGCACGGTA CCTTCGATGG GCTGGTATTG CCCCGGGCCG AGATTCTGAA GAACGCTTTT
GTGCTGTGGC CGCTGTCGTT GCTGGCGCCC GACCTGGTGC ATCCGGGTGT GGGCAAGTGC
ATGGCGCAGC TGTGGCAGGA AGCGCAGATC GATCAGGTAC TGGCCCCCGT GGCCTTTGAG
TGGCGCGGGT TGCAGTTGAC GCCCGCTTGA
 
Protein sequence
MSLSTVYLGL GSNIDREAHL CAGLDALAGI LTDMRCSPAF ESQAVGIKSG PFINFVVTGQ 
TALPLIELDR RLKFIEADNG RYAPDRKGLP LDIDVLMYDD LHGTFDGLVL PRAEILKNAF
VLWPLSLLAP DLVHPGVGKC MAQLWQEAQI DQVLAPVAFE WRGLQLTPA