Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0366 |
Symbol | bioD |
ID | 1044073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 443837 |
End bp | 444517 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143745 |
Product | dithiobiotin synthetase |
Protein accession | NP_742533 |
Protein GI | 26987108 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.55843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGG CCTTTTTCAT TGCGGGTACC GATACCGATG TCGGCAAGAC CACCATCGCC GCTGGCCTGT TGCATGCGGC GCGTTTGCAG GGCATGAGCA CGCTGGGTGC CAAGCCGGTT GCCTCGGGCT GCACCATGAC GCCGAAAGGC CTGCGCAATA GCGATGCCCT GGCGCTGATC GACGAAAGCA CGGTCAAGCT GCCTTATGAG CAGGTCAATC CGTTTGCCTT CGAGCCTGCT ATAGCCCCGC ATGTGGCGGC GCGCGAGGCA GGGGTGACGC TGGCTGTGCC AGAACTGCTC GCGGCGATGC GCAATGTGCT GCAACAAAAT GCCGACTTCA CCTTGATAGA GGGGGCCGGT GGCTGGCGCG TACCGCTGTC GGGCCTGGAG AACCTGTCCG ACCTTGCCGT TGCCCTGCGA TTGCGGGTGA TTCTGGTGGT AGGCGTGCGG TTGGGTTGCA TCAGCCATGC CTTGCTCAGC GCCGAAGCGA TCGAGCGTGA TGGGCTGCAG TTGGCGGGTT GGGTAGCAAA CATCATCGAG CCGCGCACCT CACGCCTGGA AGAGAACCTG GCCAGCCTTG CAGAGCGCCT GCCGGCGCCT TGCCTGGGGC GGGTTCCCAA GCTCAAGCAG GCCAGTGCCG ACATGGTGGC TGAGCATCTG CAACTGGATC TGCTGGATTA G
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Protein sequence | MSQAFFIAGT DTDVGKTTIA AGLLHAARLQ GMSTLGAKPV ASGCTMTPKG LRNSDALALI DESTVKLPYE QVNPFAFEPA IAPHVAAREA GVTLAVPELL AAMRNVLQQN ADFTLIEGAG GWRVPLSGLE NLSDLAVALR LRVILVVGVR LGCISHALLS AEAIERDGLQ LAGWVANIIE PRTSRLEENL ASLAERLPAP CLGRVPKLKQ ASADMVAEHL QLDLLD
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