| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0341 |
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| Symbol | waaF |
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| ID | 1044046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 414182 |
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| End bp | 415231 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637143720 |
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| Product | lipopolysaccharide heptosyltransferase II |
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| Protein accession | NP_742508 |
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| Protein GI | 26987083 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.455159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.818708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAC TGATCATTGG CCCCAGCTGG GTCGGCGACA TGGTGATGGC GCAGACCCTG
TTCCAGTGCC TGAAACAGCA GCACCCCGAC TGCGTGATCG ACGTGCTGGC CCCTGAATGG
AGCCGGCCGA TCCTCGAGCG CATGCCTGAA GTGCGCCAGG CCTTGAGCTT CCCGCTCGGC
CACGGCGCGC TGGAGCTGGC CACGCGGCGG CGCATCGGCA AGTCCCTGGC CGGCCAGTAC
GACCAGGCCA TCCTGCTGCC CAACTCGCTC AAGTCGGCGC TGGTGCCCTT TTTTGCCGGC
ATTCCCAAAC GCACCGGCTG GCGCGGTGAA ATGCGCTTCG GCCTGCTGAA CGATGTGCGC
AAGCTGGACA AGGCCCGCTA CCCGCTGATG ATCGAGCGCT TCATGGCCCT GGCTTACGCA
CCCGGCGCCG AGCTGCCGCA GCCATACCCG CGCCCCAACC TGCAGATCGA AGCGCAAAGC
CGTGACGCCG CCCTGGCCAA GTTCGGCCTG GAACTGGACC GTCCGGTACT GGCGCTGTGC
CCTGGCGCCG AGTTTGGCGA AGCCAAGCGC TGGCCGGCAG AGCACTATGC CGCTGTGGCC
GATGCGATGA TTCGCCAAGG CTGGCAAGTG TGGCTGTTTG GCTCGAAGAA CGATCACCCG
GTCGGTGAGC AGATCCGCGA CCGGCTGATT CCGGGGCTCC GTGAAGAATC GTCCAACCTG
GCCGGTGAGA CCTCGCTGGC CGAGGCCATC GACCTGATGT CCTGCGCCCA TGCCGTGGTG
TCCAACGACT CCGGCCTGAT GCACGTGGCC GCTGCGCTGA ACCGTCCGTT GGTGGCGGTG
TACGGCTCGA CTTCACCCGG CTTCACCCCG CCGCTGGCCG AACAGGTGGA AGTGGTGCGC
ACCGGTATCG AGTGCAGCCC GTGCTTTGAC CGCACCTGTC GCTTCGGCCA TTACAATTGC
CTGCGTCTGC TGGAACCGGG CAAAGTGATC GCCGCCCTGC ACAGCCTCAG CGGGCCGGAC
CTGATCGATA CCGTGGCCGA GGTCGACTAA
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| Protein sequence | MRILIIGPSW VGDMVMAQTL FQCLKQQHPD CVIDVLAPEW SRPILERMPE VRQALSFPLG
HGALELATRR RIGKSLAGQY DQAILLPNSL KSALVPFFAG IPKRTGWRGE MRFGLLNDVR
KLDKARYPLM IERFMALAYA PGAELPQPYP RPNLQIEAQS RDAALAKFGL ELDRPVLALC
PGAEFGEAKR WPAEHYAAVA DAMIRQGWQV WLFGSKNDHP VGEQIRDRLI PGLREESSNL
AGETSLAEAI DLMSCAHAVV SNDSGLMHVA AALNRPLVAV YGSTSPGFTP PLAEQVEVVR
TGIECSPCFD RTCRFGHYNC LRLLEPGKVI AALHSLSGPD LIDTVAEVD
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