Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0240 |
Symbol | ssuB |
ID | 1043803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 294596 |
End bp | 295408 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637143618 |
Product | aliphatic sulfonates transport ATP-binding subunit |
Protein accession | NP_742408 |
Protein GI | 26986983 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.10949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000841582 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGTGC TCAAGGAACA GCCGCCACGC CTGCTGCGTG GCACCCCGCT GGCCTCCAAG GGCCTGCGCA AGACCTTTGG CCAGCGCGAA GTTCTGAAGG GTATCGACCT GCACATTCCG GCCGGCCAGT TCGTGGCCAT TGTCGGCCGC AGCGGCTGCG GCAAGAGCAC TTTGCTGCGG CTGCTGGCCG GGCTGGACCA GCCCACCGCC GGGCAGCTGC TGGCCGGTGC CGCGCCGCTG GAAGAGGCCC GTGAAGAAAC CCGCCTGATG TTCCAGGACG CGCGGCTGCT GCCGTGGAAG AAGGTGATCG ACAACGTTGG CCTTGGGCTG TCTGGCGACT GGCGCCCGCG TGCGCTGGAG GCCTTGGATG CGGTTGGCCT GGCCGACCGC GCCAACGAAT GGCCGGCAGC GCTCTCGGGA GGCCAGAAGC AGCGCGTGGC TTTGGCCCGA GCCTTGATTC ACCAGCCCCG CCTGCTGCTG CTGGACGAGC CGCTGGGGGC GCTGGATGCG TTGACCCGTA TCGAGATGCA GCAACTGATC GAACGCCTGT GGCGTCAGCA CGGCTTCACT GTACTGCTGG TCACCCACGA CGTCAGCGAG GCGGTTGCCG TGGCTGACCG GGTGATCCTG ATCGAGGACG GCGAGGTCGG GCTCGACCTC ACTGTTGACC TGGCACGGCC CCGGGCGCGT GGTTCGCACC GTCTGGCCGC GCTGGAAAGC GAAGTGCTCA ACCGTGTTCT GTCCACCCCG GGCACTGCGC CCGAGCCGGA TCCTGTAGCC CCTCTGCCCA CGCAACTGCG CTGGGCGCAT TGA
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Protein sequence | MTVLKEQPPR LLRGTPLASK GLRKTFGQRE VLKGIDLHIP AGQFVAIVGR SGCGKSTLLR LLAGLDQPTA GQLLAGAAPL EEAREETRLM FQDARLLPWK KVIDNVGLGL SGDWRPRALE ALDAVGLADR ANEWPAALSG GQKQRVALAR ALIHQPRLLL LDEPLGALDA LTRIEMQQLI ERLWRQHGFT VLLVTHDVSE AVAVADRVIL IEDGEVGLDL TVDLARPRAR GSHRLAALES EVLNRVLSTP GTAPEPDPVA PLPTQLRWAH
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