Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0233 |
Symbol | tauA |
ID | 1043786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 287135 |
End bp | 288106 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637143611 |
Product | taurine ABC transporter, periplasmic binding protein |
Protein accession | NP_742401 |
Protein GI | 26986976 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4521] ABC-type taurine transport system, periplasmic component |
TIGRFAM ID | [TIGR01729] taurine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.786536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000160369 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATCCCGC ACGCTCCGCT GCGCCTGTTC GCCGCCCTGA CCCTCGCCAG CACCAGCTGG TTGGCCCAGG CAGCCGACCT GACAGTGGCC TACCAGACCA CTGTCGACCC GGCCAAAGTG GCGCAGGTCG ATGGCGACTA CGAAAAAGCC AGCAAGGCCA GCATCGACTG GCGCAAATTT GATAACGGCG CAGACGTGAT CACTGCCGTG GCCAGCGGCG ACGTGCAGAT CGGCTACTTG GGCTCCAGCC CGCTGGCCGC TGCCGCCACC CGCAAGCTGC CGGTTGAAAC CTTCCTCATC GCCACCCAGA TTGGCGCGGG TGAAGCGTTG GTGGCCCGTG ACAGCATCAA GTCGCCGCAA GACCTGATCG GCAAGAAGGT CGCCGTCCCG TTCGTGTCCA CCGGGCATTA CAGCCTGCTT GCCGCACTGA AAAGCTGGAA TATCGACCCT TCCAAGGTAC AGATTCTCAA CCTGGCGCCG CCGGCCATCA TTGCCGCCTG GAAGCGCGGC GACATCGATG CGACCTACGT GTGGGACCCG GCCCTGGGCG TGGCCAAGGA AAACGGCAAG GTCCTGATCA CCTCCGGCGA ACTGGCCCAG AAAGGCGCGC CTACCTTCGA TGCCTGGATC GTGCGCAAGG ACTTCGCCGA GAAACACCCC GATGTGGTCA AGGCCTTTGC CAAAGTCACC CTCGATGCCT ACGCCGACTA CCGCAAGGAC CCGAAAGCCT GGCTGGCCGA CAAGGGCAAC GTAGACAAGC TGGTGAAGCT GTCCGGTGCC AAGGCCAGCG ACATCCCGGT GCTGCTGGAG GGCAACGTCT ACCCGCTGGC CGCTGACCAG GCCAACGCCC TGGGCGCGCC GACCACCCAG GCGCTGACGG ACACCGCCAA CTTCCTCAAG CAGCAAGGCA AAGTCGAAGC AGTGCTGCCG GACTACTCGC CGTACGTCAG CGCCAAGTTC CTTCCAAACT GA
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Protein sequence | MIPHAPLRLF AALTLASTSW LAQAADLTVA YQTTVDPAKV AQVDGDYEKA SKASIDWRKF DNGADVITAV ASGDVQIGYL GSSPLAAAAT RKLPVETFLI ATQIGAGEAL VARDSIKSPQ DLIGKKVAVP FVSTGHYSLL AALKSWNIDP SKVQILNLAP PAIIAAWKRG DIDATYVWDP ALGVAKENGK VLITSGELAQ KGAPTFDAWI VRKDFAEKHP DVVKAFAKVT LDAYADYRKD PKAWLADKGN VDKLVKLSGA KASDIPVLLE GNVYPLAADQ ANALGAPTTQ ALTDTANFLK QQGKVEAVLP DYSPYVSAKF LPN
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