Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0214 |
Symbol | gabT |
ID | 1043757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 264874 |
End bp | 266151 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143592 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | NP_742382 |
Protein GI | 26986957 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0174674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA CCAACGAATC CTTGATGCAA CGTCGTGTAG CTGCCGTCCC ACGTGGCGTC GGCCAGATCC ACCCGATCTT CGTCGACACC GCGAAGAACT CGACCGTGAT CGACGTTGAA GGCCGCGAAC TGATCGACTT CGCCGGCGGC ATCGCAGTAC TGAACACCGG CCACCTGCAC CCGAAAGTAG TTGCAGCCGT GCAAGAGCAG CTGACCAAGG TCAGCCACAC CTGCTTCCAG GTGCTGGCTT ACGAGCCCTA TGTAGAGCTG TGCGAAAAGA TCAACAAGCT GGTCCCAGGC GACTTCGACA AGAAGACCCT GCTGGTCACC ACCGGCTCCG AAGCCGTTGA AAACGCCGTC AAGATCGCCC GTGCTGCCAC TGGCCGCGCT GGCGTCATCG CCTTCACCGG CGGTTATCAC GGCCGTACCA TGATGACCCT GGGCCTGACC GGCAAGGTCG TGCCGTACTC CGCTGGCATG GGCCTGATGC CAGGCGGCAT CTTCCGCGCC CTGTTCCCGA GCGAACTGCA CGGTATCAGC GTTGACGACG CCATCGCCTC GGTCGAGCGC ATCTTCAAGA ACGACGCCGA GCCGCGCGAC ATCGCCGCAA TCATCCTCGA GCCAGTACAA GGCGAAGGCG GCTTCCTGCC AGCGCCGAAA GAGCTGATGA AGCGCCTGCG CGCCCTGTGC GACCAGCACG GCATCCTGCT GATCGCCGAC GAAGTACAAA CTGGCGCTGG CCGTACCGGC ACCTTCTTCG CCATGGAACA GATGGGCGTT GCGCCTGACC TGACCACCTT CGCCAAATCC ATCGCTGGCG GCTTCCCGCT GGCCGGTGTG TGCGGCAAGG CCGAATACAT GGACGCCATC GCGCCTGGCG GCCTGGGCGG TACCTACGCC GGTTCGCCGA TCGCTTGCGC CGCGGCCCTG GCCGTGATCG AAGTGTTCGA AGAAGAAAAA CTGCTGGACC GCAGCAAGGC TGTGGGTGAG CGCCTGACCG CCGGCCTGCG CGAAATCCAG AAGAAGTACC CGATCATCGG CGACGTCCGT GGTCTGGGCT CGATGATTGC CGTCGAAGTC TTCGAGAAGG GCACTCACAC CCCGAACGCT GCTGCTGTTG GCCAGGTTGT CGCCAAGGCT CGTGAAAAGG GTCTGATCCT GCTGTCTTGC GGCACCTACG GCAACGTCCT GCGTATCCTG GTTCCGCTGA CCGCCGAAGA CGCGCTGCTG GACAAAGGCC TGGCCATCAT CGAAGAGTGC TTCGCTGAAA TCGCCTGA
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Protein sequence | MSKTNESLMQ RRVAAVPRGV GQIHPIFVDT AKNSTVIDVE GRELIDFAGG IAVLNTGHLH PKVVAAVQEQ LTKVSHTCFQ VLAYEPYVEL CEKINKLVPG DFDKKTLLVT TGSEAVENAV KIARAATGRA GVIAFTGGYH GRTMMTLGLT GKVVPYSAGM GLMPGGIFRA LFPSELHGIS VDDAIASVER IFKNDAEPRD IAAIILEPVQ GEGGFLPAPK ELMKRLRALC DQHGILLIAD EVQTGAGRTG TFFAMEQMGV APDLTTFAKS IAGGFPLAGV CGKAEYMDAI APGGLGGTYA GSPIACAAAL AVIEVFEEEK LLDRSKAVGE RLTAGLREIQ KKYPIIGDVR GLGSMIAVEV FEKGTHTPNA AAVGQVVAKA REKGLILLSC GTYGNVLRIL VPLTAEDALL DKGLAIIEEC FAEIA
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