Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0205 |
Symbol | |
ID | 1043735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 256314 |
End bp | 258038 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143584 |
Product | putative oxidoreductase |
Protein accession | NP_742374 |
Protein GI | 26986949 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.321427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.765338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCC AGACCCAGGA CTACGACATC ATCATCATCG GTGGCGGTAC GGCCGGGCCG ATGGCGGCGA TCAAGGCCAA GGAGCAGGAC AAAAGCCTGC GCGTGCTGCT GCTGGACAAG GCCAATGTCA AGCGCAGCGG TGCCATTAGT ATGGGCATGG ACGGCTTGAA CAACGCCATC ATCCCCGGCC ACGCCACCCC CGAGCAGTAC ACCAAGGAAA TCACCGTGGC CAATGACGGC ATCGTCAACC AGGCCACCGT GCATGCCTAC GCAACCCACA GCTTTGAAAC CATCGAGCAA CTCGACCGCT GGGGCGTGAA GTTCGAGAAG GACGAGACCG GCGACTACGC GGTGAAGAAG GTTCACCACA TGGGCGCGTA CGTGCTGCCC ATGCCCGAAG GCCACGACAT CAAGAAGGTG TTGTACCGCC AGCTCAAGCG TGCCCGGGTG GAGATCAGCA ACCGTCTGGT CTGCACCCGT GTGCTGCTCG ATGGCGAAGG CGCCGCCGCG GGTGTGCTGG GCTTTGACTG CCGCAGCGGC GAGTTTCGGG TGGCGCGGGC CAAGGCGGTG ATCCTTGCCT GCGGCGCCGC CGGGCGCCTG GGCCTGCCGT CTTCGGGCTA TTTGATGGGC ACCTACGAGA ACCCGACGAA CGCCGGTGAT GGCTACGCCA TGGCCTACCA CGCAGGCGCC GAGCTGGCCA ACCTCGAGTG CTTCCAGATC AACCCGCTGA TCAAGGACTA CAACGGCCCG GCCTGTGCCT ACGTCACCGG CCCGCTGGGT GGGTACACCG CCAACAGCAA AGGCGAGCGC TTCATCGAGT GCGACTACTG GAGCGGCCAG ATGATGTGGG AGTTCCACCA GGAGCTCGAA GGCGGCAATG GCCCGGTGTT CCTCAAACTG GACCACTTGG CCGAAGAGAC CATCCAGAAC ATCGAAGAGA TCCTGCACAG CAACGAGCGC CCCAGTCGTG GTCAGTTTCA CGCCGGGCGT GGCACCGACT ACCGCCAACA CATGGTCGAG ATGCATATCT CCGAGATCGG TTTCTGCTCC GGTCATTCGG CGTCGGGCGT GTGGGTCAAT GAAAAGGCCG AGACCAGCGT CAAAGGGCTG TATGCCGCAG GCGACATGGC TGCGGTGCCG CACAACTACA TGCTCGGCGC CTTTACCTAT GGCTGGTTTG CCGGAGTGAA CGCCGCCCAT TACGTGGCCG GGCGCGAACT CGCCGAGGTC GATGCCGAGC AGGTCGAACG CGAACGGGCG CGGGTGTTTG CCCCGCTGCA GCGTGAGCAT GGCCTGCCGC CAGCCCAGGT CGAGTACAAG CTCAGGCGCA TGGTCAACGA CTACCTGCAG CCGCCGAAGG TGACCAAGAA GATGGAAATC GGCCTGGCGC GCTTTGCCGA GATCGAGCGT GATCTGGAGC AGATGAAGGC CAACAACCCT CATGAGCTGA TGCGTGCGAT GGAAGTGTCG GTGATTCGCG ATTGCGCCGA GATGGCGGCG CGGTCCTCGC TGTTCCGCGA GGAAAGCCGC TGGGGCCTGT ACCACCACCG GGTGGACTTC CCTGAGCGCA ACGATGGCGA GTGGTTCTGC CATTGCCACC TGAAAAAAGG CGAGAACGGT GAAATGACCA GCTTCAAGAA GGCCGTCGAA CCCTACCTGA TCGCCCTGGA CGCCGATGAG CAGACCGCCT ATGACCGGCT GCGAGTGAAG GCTGATGCAG CGTGA
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Protein sequence | MSIQTQDYDI IIIGGGTAGP MAAIKAKEQD KSLRVLLLDK ANVKRSGAIS MGMDGLNNAI IPGHATPEQY TKEITVANDG IVNQATVHAY ATHSFETIEQ LDRWGVKFEK DETGDYAVKK VHHMGAYVLP MPEGHDIKKV LYRQLKRARV EISNRLVCTR VLLDGEGAAA GVLGFDCRSG EFRVARAKAV ILACGAAGRL GLPSSGYLMG TYENPTNAGD GYAMAYHAGA ELANLECFQI NPLIKDYNGP ACAYVTGPLG GYTANSKGER FIECDYWSGQ MMWEFHQELE GGNGPVFLKL DHLAEETIQN IEEILHSNER PSRGQFHAGR GTDYRQHMVE MHISEIGFCS GHSASGVWVN EKAETSVKGL YAAGDMAAVP HNYMLGAFTY GWFAGVNAAH YVAGRELAEV DAEQVERERA RVFAPLQREH GLPPAQVEYK LRRMVNDYLQ PPKVTKKMEI GLARFAEIER DLEQMKANNP HELMRAMEVS VIRDCAEMAA RSSLFREESR WGLYHHRVDF PERNDGEWFC HCHLKKGENG EMTSFKKAVE PYLIALDADE QTAYDRLRVK ADAA
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